PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
XP_023894164.1 Flavonoid 4CL low borderline
XP_023895209.1 Flavonoid 4CL low borderline
XP_023895210.1 Flavonoid 4CL low borderline
XP_023895388.1 Flavonoid 4CL medium pass
XP_023897014.1 Flavonoid 4CL medium pass
XP_023898245.1 Flavonoid 4CL low borderline
XP_023898246.1 Flavonoid 4CL medium pass
XP_023899456.1 Flavonoid 4CL low borderline
XP_023899801.1 Flavonoid 4CL low borderline
XP_023900021.1 Flavonoid 4CL medium pass
XP_023900649.1 Flavonoid 4CL low borderline
XP_023900978.1 Flavonoid 4CL low borderline
XP_023902846.1 Flavonoid 4CL low borderline
XP_023904751.1 Flavonoid 4CL low borderline
XP_023905187.1 Flavonoid 4CL medium pass
XP_023905289.1 Flavonoid 4CL low borderline
XP_023906410.1 Flavonoid 4CL medium pass
XP_023906962.1 Flavonoid 4CL low borderline
XP_023906963.1 Flavonoid 4CL low borderline
XP_023906973.1 Flavonoid 4CL low borderline
XP_023907022.1 Flavonoid 4CL medium pass
XP_023907090.1 Flavonoid 4CL low borderline
XP_023907272.1 Flavonoid 4CL medium pass
XP_023907762.1 Flavonoid 4CL low borderline
XP_023907871.1 Flavonoid 4CL low borderline
XP_023907979.1 Flavonoid 4CL low borderline
XP_023908123.1 Flavonoid 4CL low borderline
XP_023908644.1 Flavonoid 4CL low borderline
XP_023908836.1 Flavonoid 4CL low borderline
XP_023909594.1 Flavonoid 4CL low borderline
XP_023909597.1 Flavonoid 4CL low borderline
XP_023909598.1 Flavonoid 4CL low borderline
XP_023909604.1 Flavonoid 4CL low borderline
XP_023909605.1 Flavonoid 4CL low borderline
XP_023909606.1 Flavonoid 4CL low borderline
XP_023909607.1 Flavonoid 4CL low borderline
XP_023909639.1 Flavonoid 4CL low borderline
XP_023909640.1 Flavonoid 4CL low borderline
XP_023909802.1 Flavonoid 4CL medium pass
XP_023909870.1 Flavonoid 4CL low borderline
XP_023909882.1 Flavonoid 4CL low borderline
XP_023909898.1 Flavonoid 4CL low borderline
XP_023909899.1 Flavonoid 4CL low borderline
XP_023909902.1 Flavonoid 4CL low borderline
XP_023909905.1 Flavonoid 4CL low borderline
XP_023909906.1 Flavonoid 4CL low borderline
XP_023909961.1 Flavonoid 4CL low borderline
XP_023910540.1 Flavonoid 4CL medium pass
XP_023910555.1 Flavonoid 4CL medium pass
XP_023911500.1 Flavonoid 4CL low borderline