PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
XP_023911786.1 Phenylpropanoid 4CL medium pass
XP_023911787.1 Phenylpropanoid 4CL medium pass
XP_023912271.1 Phenylpropanoid 4CL low borderline
XP_023913669.1 Phenylpropanoid 4CL medium pass
XP_023914150.1 Phenylpropanoid 4CL medium pass
XP_023914151.1 Phenylpropanoid 4CL medium pass
XP_023914704.1 Phenylpropanoid 4CL medium pass
XP_023914730.1 Phenylpropanoid 4CL medium pass
XP_023915250.1 Phenylpropanoid 4CL low borderline
XP_023915262.1 Phenylpropanoid 4CL medium pass
XP_023915304.1 Phenylpropanoid 4CL low borderline
XP_023915794.1 Phenylpropanoid 4CL low borderline
XP_023916131.1 Phenylpropanoid 4CL medium pass
XP_023916876.1 Phenylpropanoid 4CL low borderline
XP_023916877.1 Phenylpropanoid 4CL low borderline
XP_023916878.1 Phenylpropanoid 4CL low borderline
XP_023918044.1 Phenylpropanoid 4CL low borderline
XP_023918045.1 Phenylpropanoid 4CL low borderline
XP_023918046.1 Phenylpropanoid 4CL low borderline
XP_023918745.1 Phenylpropanoid 4CL low borderline
XP_023919744.1 Phenylpropanoid 4CL low borderline
XP_023919871.1 Phenylpropanoid 4CL low borderline
XP_023919880.1 Phenylpropanoid 4CL medium pass
XP_023920319.1 Phenylpropanoid 4CL medium pass
XP_023920328.1 Phenylpropanoid 4CL low borderline
XP_023921192.1 Phenylpropanoid 4CL low borderline
XP_023922660.1 Phenylpropanoid 4CL medium pass
XP_023922725.1 Phenylpropanoid 4CL medium pass
XP_023924617.1 Phenylpropanoid 4CL low borderline
XP_023925234.1 Phenylpropanoid 4CL medium pass
XP_023925235.1 Phenylpropanoid 4CL medium pass
XP_023925385.1 Phenylpropanoid 4CL low borderline
XP_023925936.1 Phenylpropanoid 4CL medium pass
XP_023926111.1 Phenylpropanoid 4CL low borderline
XP_023926273.1 Phenylpropanoid 4CL low borderline
XP_023926713.1 Phenylpropanoid 4CL medium pass
XP_023927295.1 Phenylpropanoid 4CL low borderline
XP_023927296.1 Phenylpropanoid 4CL low borderline
XP_023927297.1 Phenylpropanoid 4CL low borderline
XP_023927298.1 Phenylpropanoid 4CL low borderline
XP_023927299.1 Phenylpropanoid 4CL low borderline
XP_023927300.1 Phenylpropanoid 4CL low borderline
XP_023927301.1 Phenylpropanoid 4CL low borderline
XP_023928226.1 Phenylpropanoid 4CL medium pass
XP_023928621.1 Phenylpropanoid 4CL low borderline
XP_023929147.1 Phenylpropanoid 4CL low borderline
XP_023929302.1 Phenylpropanoid 4CL medium pass
XP_023870512.1 Phenylpropanoid C3'H/CYP98A low borderline
XP_023870577.1 Phenylpropanoid C3'H/CYP98A medium pass
XP_023870806.1 Phenylpropanoid C3'H/CYP98A low borderline