PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
XP_023870398.1 Flavonoid ANS/LDOX medium borderline
XP_023873946.1 Flavonoid ANS/LDOX medium borderline
XP_023881178.1 Flavonoid ANS/LDOX medium pass
XP_023885199.1 Flavonoid ANS/LDOX medium borderline
XP_023885200.1 Flavonoid ANS/LDOX medium borderline
XP_023885201.1 Flavonoid ANS/LDOX medium borderline
XP_023888875.1 Flavonoid ANS/LDOX medium borderline
XP_023898869.1 Flavonoid ANS/LDOX medium pass
XP_023899845.1 Flavonoid ANS/LDOX medium borderline
XP_023904436.1 Flavonoid ANS/LDOX low borderline
XP_023905343.1 Flavonoid ANS/LDOX medium borderline
XP_023919972.1 Flavonoid ANS/LDOX medium borderline
XP_023928500.1 Flavonoid ANS/LDOX medium borderline
XP_023873317.1 Flavonoid C4H medium borderline
XP_023873318.1 Flavonoid C4H medium borderline
XP_023882582.1 Flavonoid C4H medium borderline
XP_023887832.1 Flavonoid C4H low borderline
XP_023893624.1 Flavonoid C4H medium borderline
XP_023894247.1 Flavonoid C4H medium borderline
XP_023902700.1 Flavonoid C4H low borderline
XP_023904446.1 Flavonoid C4H medium borderline
XP_023917170.1 Flavonoid C4H low borderline
XP_023917772.1 Flavonoid C4H low borderline
XP_023917773.1 Flavonoid C4H low borderline
XP_023924616.1 Flavonoid C4H medium borderline
XP_023924624.1 Flavonoid C4H medium borderline
XP_023924643.1 Flavonoid C4H medium borderline
XP_023926810.1 Flavonoid C4H low borderline
XP_023927429.1 Flavonoid C4H medium borderline
XP_023928558.1 Flavonoid C4H medium pass
XP_023929085.1 Flavonoid C4H medium borderline
XP_023904011.1 Flavonoid CHI medium pass
XP_023907747.1 Flavonoid CHI medium pass
XP_023914694.1 Flavonoid CHI low borderline
XP_023914695.1 Flavonoid CHI low borderline
XP_023879873.1 Flavonoid CHS medium pass
XP_023883745.1 Flavonoid CHS medium pass
XP_023888452.1 Flavonoid CHS medium pass
XP_023896520.1 Flavonoid CHS medium pass
XP_023900626.1 Flavonoid CHS medium pass
XP_023900628.1 Flavonoid CHS medium pass
XP_023913768.1 Flavonoid CHS low borderline
XP_023914191.1 Flavonoid CHS medium pass
XP_023916004.1 Flavonoid CHS medium pass
XP_023874971.1 Flavonoid DFR low borderline
XP_023875168.1 Flavonoid DFR medium pass
XP_023878134.1 Flavonoid DFR medium borderline
XP_023881408.1 Flavonoid DFR medium borderline
XP_023888244.1 Flavonoid DFR low borderline
XP_023894691.1 Flavonoid DFR medium borderline