PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Family-Level Assignments
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
XP_023880639.1 Rosmarinic Acid C4H low borderline
XP_023880644.1 Rosmarinic Acid C4H low borderline
XP_023880700.1 Rosmarinic Acid C4H low borderline
XP_023880706.1 Rosmarinic Acid C4H low borderline
XP_023880736.1 Rosmarinic Acid C4H low borderline
XP_023880769.1 Rosmarinic Acid C4H low borderline
XP_023880836.1 Rosmarinic Acid C4H low borderline
XP_023880839.1 Rosmarinic Acid C4H low borderline
XP_023880843.1 Rosmarinic Acid C4H low borderline
XP_023881632.1 Rosmarinic Acid C4H low borderline
XP_023881983.1 Rosmarinic Acid C4H medium pass
XP_023882012.1 Rosmarinic Acid C4H low borderline
XP_023882271.1 Rosmarinic Acid C4H medium pass
XP_023882330.1 Rosmarinic Acid C4H low borderline
XP_023882582.1 Rosmarinic Acid C4H low borderline
XP_023882638.1 Rosmarinic Acid C4H low borderline
XP_023883324.1 Rosmarinic Acid C4H medium pass
XP_023883325.1 Rosmarinic Acid C4H medium pass
XP_023883849.1 Rosmarinic Acid C4H medium pass
XP_023883926.1 Rosmarinic Acid C4H medium pass
XP_023883927.1 Rosmarinic Acid C4H medium pass
XP_023883966.1 Rosmarinic Acid C4H medium pass
XP_023884189.1 Rosmarinic Acid C4H low borderline
XP_023884190.1 Rosmarinic Acid C4H low borderline
XP_023884318.1 Rosmarinic Acid C4H medium pass
XP_023884347.1 Rosmarinic Acid C4H medium pass
XP_023884378.1 Rosmarinic Acid C4H low borderline
XP_023884379.1 Rosmarinic Acid C4H low borderline
XP_023884594.1 Rosmarinic Acid C4H low borderline
XP_023884827.1 Rosmarinic Acid C4H medium pass
XP_023884949.1 Rosmarinic Acid C4H low borderline
XP_023885051.1 Rosmarinic Acid C4H medium pass
XP_023885907.1 Rosmarinic Acid C4H medium pass
XP_023886170.1 Rosmarinic Acid C4H low borderline
XP_023886322.1 Rosmarinic Acid C4H low borderline
XP_023886323.1 Rosmarinic Acid C4H medium pass
XP_023886328.1 Rosmarinic Acid C4H low borderline
XP_023886331.1 Rosmarinic Acid C4H medium pass
XP_023886343.1 Rosmarinic Acid C4H medium pass
XP_023886344.1 Rosmarinic Acid C4H medium pass
XP_023886352.1 Rosmarinic Acid C4H medium pass
XP_023887418.1 Rosmarinic Acid C4H low borderline
XP_023887832.1 Rosmarinic Acid C4H low borderline
XP_023888006.1 Rosmarinic Acid C4H low borderline
XP_023888011.1 Rosmarinic Acid C4H low borderline
XP_023888813.1 Rosmarinic Acid C4H low borderline
XP_023888814.1 Rosmarinic Acid C4H low borderline
XP_023888815.1 Rosmarinic Acid C4H low borderline
XP_023888895.1 Rosmarinic Acid C4H low borderline
XP_023888896.1 Rosmarinic Acid C4H low borderline