PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1104
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Rcrescaffold105510003600 Flavonoid 4CL medium pass
Rcrescaffold12820018630 Flavonoid 4CL medium pass
Rcrescaffold1357560036640 Flavonoid 4CL medium pass
Rcrescaffold1374450045570 Flavonoid 4CL medium pass
Rcrescaffold1376590047880 Flavonoid 4CL medium pass
Rcrescaffold1381580050220 Flavonoid 4CL medium pass
Rcrescaffold1382500052010 Flavonoid 4CL low borderline
Rcrescaffold1382870055670 Flavonoid 4CL low borderline
Rcrescaffold1382970056380 Flavonoid 4CL medium pass
Rcrescaffold1383800060750 Flavonoid 4CL medium pass
Rcrescaffold1384440066810 Flavonoid 4CL medium pass
Rcrescaffold1384470067120 Flavonoid 4CL medium pass
Rcrescaffold1384490067300 Flavonoid 4CL medium pass
Rcrescaffold1384560068170 Flavonoid 4CL medium pass
Rcrescaffold1384560068180 Flavonoid 4CL medium pass
Rcrescaffold1384580069230 Flavonoid 4CL medium pass
Rcrescaffold1384860074220 Flavonoid 4CL low borderline
Rcrescaffold1385010077680 Flavonoid 4CL medium pass
Rcrescaffold1385130079720 Flavonoid 4CL low borderline
Rcrescaffold1390080121040 Flavonoid 4CL medium pass
Rcrescaffold1391560142690 Flavonoid 4CL medium pass
Rcrescaffold1391910147840 Flavonoid 4CL low borderline
Rcrescaffold1391970148170 Flavonoid 4CL low borderline
Rcrescaffold1393500155400 Flavonoid 4CL medium pass
Rcrescaffold1393840157920 Flavonoid 4CL medium pass
Rcrescaffold1393890158470 Flavonoid 4CL low borderline
Rcrescaffold1393930158950 Flavonoid 4CL low borderline
Rcrescaffold178340191880 Flavonoid 4CL low borderline
Rcrescaffold193080197820 Flavonoid 4CL low borderline
Rcrescaffold22710210830 Flavonoid 4CL low borderline
Rcrescaffold237320214820 Flavonoid 4CL medium pass
Rcrescaffold31430235450 Flavonoid 4CL medium pass
Rcrescaffold37450248270 Flavonoid 4CL low borderline
Rcrescaffold40730253680 Flavonoid 4CL low borderline
Rcrescaffold495320263690 Flavonoid 4CL medium pass
Rcrescaffold49720264680 Flavonoid 4CL medium pass
Rcrescaffold534870268580 Flavonoid 4CL medium pass
Rcrescaffold5900275810 Flavonoid 4CL low borderline
Rcrescaffold59620278370 Flavonoid 4CL medium pass
Rcrescaffold60920279570 Flavonoid 4CL low borderline
Rcrescaffold70440293200 Flavonoid 4CL medium pass
Rcrescaffold84480305140 Flavonoid 4CL medium pass
Rcrescaffold85450306530 Flavonoid 4CL medium pass
Rcrescaffold1348330031230 Flavonoid ANR low borderline
Rcrescaffold1351420032810 Flavonoid ANR low borderline
Rcrescaffold1355960034910 Flavonoid ANR low borderline
Rcrescaffold1355960034920 Flavonoid ANR low borderline
Rcrescaffold1364970040640 Flavonoid ANR medium borderline
Rcrescaffold1384660070030 Flavonoid ANR medium borderline
Rcrescaffold1385050078640 Flavonoid ANR medium borderline