PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1104
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Rcrescaffold1385820088900 Flavonoid ANR medium borderline
Rcrescaffold1387400102750 Flavonoid ANR low borderline
Rcrescaffold1387940107400 Flavonoid ANR medium pass
Rcrescaffold14450177720 Flavonoid ANR low borderline
Rcrescaffold183720194770 Flavonoid ANR low borderline
Rcrescaffold208720202670 Flavonoid ANR low borderline
Rcrescaffold2190207170 Flavonoid ANR medium borderline
Rcrescaffold236580214570 Flavonoid ANR medium borderline
Rcrescaffold41970255200 Flavonoid ANR medium borderline
Rcrescaffold135620035140 Flavonoid ANS/LDOX low borderline
Rcrescaffold1384310064590 Flavonoid ANS/LDOX medium borderline
Rcrescaffold1384440066670 Flavonoid ANS/LDOX medium borderline
Rcrescaffold1385810088870 Flavonoid ANS/LDOX medium borderline
Rcrescaffold159400183180 Flavonoid ANS/LDOX low borderline
Rcrescaffold171710187090 Flavonoid ANS/LDOX medium borderline
Rcrescaffold21640205240 Flavonoid ANS/LDOX medium pass
Rcrescaffold21640205390 Flavonoid ANS/LDOX medium borderline
Rcrescaffold264370220260 Flavonoid ANS/LDOX medium borderline
Rcrescaffold56790272810 Flavonoid ANS/LDOX medium borderline
Rcrescaffold80550301820 Flavonoid ANS/LDOX medium borderline
Rcrescaffold91940310930 Flavonoid ANS/LDOX low borderline
Rcrescaffold112460007420 Flavonoid C4H low borderline
Rcrescaffold1297570021980 Flavonoid C4H low borderline
Rcrescaffold1299520022470 Flavonoid C4H medium borderline
Rcrescaffold1376350047770 Flavonoid C4H medium borderline
Rcrescaffold1385980089870 Flavonoid C4H low borderline
Rcrescaffold1386050090210 Flavonoid C4H medium borderline
Rcrescaffold80550302130 Flavonoid C4H low borderline
Rcrescaffold1385320083120 Flavonoid CHI medium pass
Rcrescaffold1385640086810 Flavonoid CHI medium pass
Rcrescaffold7620297770 Flavonoid CHI medium pass
Rcrescaffold1384860074310 Flavonoid CHS medium pass
Rcrescaffold1388690111700 Flavonoid CHS medium pass
Rcrescaffold1391700144740 Flavonoid CHS medium pass
Rcrescaffold45350259100 Flavonoid CHS medium pass
Rcrescaffold46230261050 Flavonoid CHS medium pass
Rcrescaffold79750300460 Flavonoid CHS medium pass
Rcrescaffold103650002770 Flavonoid DFR medium borderline
Rcrescaffold1355960034990 Flavonoid DFR medium pass
Rcrescaffold1376350047320 Flavonoid DFR medium borderline
Rcrescaffold1388300109570 Flavonoid DFR medium borderline
Rcrescaffold1390030120170 Flavonoid DFR medium borderline
Rcrescaffold1390550125640 Flavonoid DFR medium borderline
Rcrescaffold1392960153460 Flavonoid DFR medium borderline
Rcrescaffold1393180154580 Flavonoid DFR medium borderline
Rcrescaffold16980186880 Flavonoid DFR low borderline
Rcrescaffold192440197750 Flavonoid DFR medium borderline
Rcrescaffold245610216590 Flavonoid DFR low borderline
Rcrescaffold640283010 Flavonoid DFR medium borderline
Rcrescaffold106160004770 Flavonoid F3'5'H/CYP75A medium borderline