PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1104
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Rcrescaffold130500023690 Flavonoid F3'5'H/CYP75A medium borderline
Rcrescaffold1376330047090 Flavonoid F3'5'H/CYP75A medium borderline
Rcrescaffold1384600069480 Flavonoid F3'5'H/CYP75A medium borderline
Rcrescaffold1384820073280 Flavonoid F3'5'H/CYP75A medium borderline
Rcrescaffold1384900075880 Flavonoid F3'5'H/CYP75A medium borderline
Rcrescaffold1391550141460 Flavonoid F3'5'H/CYP75A medium borderline
Rcrescaffold1460870178340 Flavonoid F3'5'H/CYP75A medium borderline
Rcrescaffold26460220350 Flavonoid F3'5'H/CYP75A medium borderline
Rcrescaffold351420241600 Flavonoid F3'5'H/CYP75A low borderline
Rcrescaffold367550246430 Flavonoid F3'5'H/CYP75A low borderline
Rcrescaffold5230267290 Flavonoid F3'5'H/CYP75A medium borderline
Rcrescaffold5230267400 Flavonoid F3'5'H/CYP75A medium borderline
Rcrescaffold11320008220 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold126070015570 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold130500023590 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold1348330030850 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold1351010032390 Flavonoid F3'H/CYP75B low borderline
Rcrescaffold1351010032400 Flavonoid F3'H/CYP75B low borderline
Rcrescaffold1357560036190 Flavonoid F3'H/CYP75B low borderline
Rcrescaffold1357560036480 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold1357560036870 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold1372390044190 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold1374450045810 Flavonoid F3'H/CYP75B low borderline
Rcrescaffold1382620052650 Flavonoid F3'H/CYP75B low borderline
Rcrescaffold1382640052910 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold1385410083650 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold1385440083840 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold1385520085060 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold1386070090580 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold1386490094620 Flavonoid F3'H/CYP75B low borderline
Rcrescaffold1386720096490 Flavonoid F3'H/CYP75B low borderline
Rcrescaffold1387390102480 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold1387400102850 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold1388270109300 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold1391240135090 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold1391700144900 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold1391700144940 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold1394070160790 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold1394460163980 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold1395080168160 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold15680181790 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold15680181800 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold18910196640 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold198190199050 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold217190206160 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold267300221480 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold270020222510 Flavonoid F3'H/CYP75B low borderline
Rcrescaffold295330230080 Flavonoid F3'H/CYP75B low borderline
Rcrescaffold32640238280 Flavonoid F3'H/CYP75B medium borderline
Rcrescaffold36770246650 Flavonoid F3'H/CYP75B low borderline