PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1486
Candidate Protein Records
1104
Pathway-Level Records
2825
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Rcrescaffold32600237850 Rosmarinic Acid C4H low borderline
Rcrescaffold32640238280 Rosmarinic Acid C4H medium pass
Rcrescaffold35180241710 Rosmarinic Acid C4H low borderline
Rcrescaffold357000242940 Rosmarinic Acid C4H medium pass
Rcrescaffold36840247270 Rosmarinic Acid C4H medium pass
Rcrescaffold37190247970 Rosmarinic Acid C4H medium pass
Rcrescaffold37320248210 Rosmarinic Acid C4H medium pass
Rcrescaffold416810254640 Rosmarinic Acid C4H low borderline
Rcrescaffold423640255850 Rosmarinic Acid C4H low borderline
Rcrescaffold45350259370 Rosmarinic Acid C4H low borderline
Rcrescaffold45350259620 Rosmarinic Acid C4H low borderline
Rcrescaffold48900263340 Rosmarinic Acid C4H low borderline
Rcrescaffold495320264230 Rosmarinic Acid C4H low borderline
Rcrescaffold49720264900 Rosmarinic Acid C4H low borderline
Rcrescaffold511520266040 Rosmarinic Acid C4H medium pass
Rcrescaffold511520266050 Rosmarinic Acid C4H medium pass
Rcrescaffold5230267290 Rosmarinic Acid C4H low borderline
Rcrescaffold5230267400 Rosmarinic Acid C4H low borderline
Rcrescaffold533870268300 Rosmarinic Acid C4H low borderline
Rcrescaffold533870268310 Rosmarinic Acid C4H medium pass
Rcrescaffold533870268320 Rosmarinic Acid C4H medium pass
Rcrescaffold54670270010 Rosmarinic Acid C4H low borderline
Rcrescaffold602960278450 Rosmarinic Acid C4H low borderline
Rcrescaffold64580285460 Rosmarinic Acid C4H low borderline
Rcrescaffold64580285470 Rosmarinic Acid C4H low borderline
Rcrescaffold64580285490 Rosmarinic Acid C4H low borderline
Rcrescaffold68020289860 Rosmarinic Acid C4H low borderline
Rcrescaffold69080291750 Rosmarinic Acid C4H low borderline
Rcrescaffold69080292130 Rosmarinic Acid C4H low borderline
Rcrescaffold75350296450 Rosmarinic Acid C4H medium pass
Rcrescaffold80200301180 Rosmarinic Acid C4H low borderline
Rcrescaffold80550302130 Rosmarinic Acid C4H low borderline
Rcrescaffold80680302560 Rosmarinic Acid C4H low borderline
Rcrescaffold83070304030 Rosmarinic Acid C4H medium pass
Rcrescaffold86060306970 Rosmarinic Acid C4H medium pass
Rcrescaffold87360307510 Rosmarinic Acid C4H low borderline
Rcrescaffold89750309950 Rosmarinic Acid C4H low borderline
Rcrescaffold9440311910 Rosmarinic Acid C4H low borderline
Rcrescaffold99320314970 Rosmarinic Acid C4H medium pass
Rcrescaffold12820018670 Rosmarinic Acid CPR medium pass
Rcrescaffold1358800037740 Rosmarinic Acid CPR medium pass
Rcrescaffold1394880167210 Rosmarinic Acid CPR medium pass
Rcrescaffold198500199640 Rosmarinic Acid CPR medium pass
Rcrescaffold29830230660 Rosmarinic Acid CPR low borderline
Rcrescaffold36180244460 Rosmarinic Acid CPR low borderline
Rcrescaffold46120260740 Rosmarinic Acid CPR low borderline
Rcrescaffold54670269990 Rosmarinic Acid CPR low borderline
Rcrescaffold57490273520 Rosmarinic Acid CPR medium pass
Rcrescaffold1298480022260 Rosmarinic Acid HPPR medium pass
Rcrescaffold1385760088360 Rosmarinic Acid HPPR medium pass