PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1486
Candidate Protein Records
1104
Pathway-Level Records
2825
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Rcrescaffold1388570111000 Rosmarinic Acid HPPR medium pass
Rcrescaffold153800181470 Rosmarinic Acid HPPR medium pass
Rcrescaffold63470282400 Rosmarinic Acid HPPR medium pass
Rcrescaffold83070304040 Rosmarinic Acid HPPR medium pass
Rcrescaffold83710304660 Rosmarinic Acid HPPR medium pass
Rcrescaffold133640028180 Rosmarinic Acid PAL high pass
Rcrescaffold1373740045090 Rosmarinic Acid PAL high pass
Rcrescaffold1391300136400 Rosmarinic Acid PAL high pass
Rcrescaffold159400183720 Rosmarinic Acid PAL high pass
Rcrescaffold218320207060 Rosmarinic Acid PAL medium pass
Rcrescaffold77070298590 Rosmarinic Acid PAL high pass
Rcrescaffold1348370031370 Rosmarinic Acid RAS medium pass
Rcrescaffold1383270057890 Rosmarinic Acid RAS low borderline
Rcrescaffold1386280092840 Rosmarinic Acid RAS low borderline
Rcrescaffold1387980107500 Rosmarinic Acid RAS low borderline
Rcrescaffold1390890130660 Rosmarinic Acid RAS low borderline
Rcrescaffold1390950131820 Rosmarinic Acid RAS low borderline
Rcrescaffold1393500155540 Rosmarinic Acid RAS low borderline
Rcrescaffold27620224580 Rosmarinic Acid RAS low borderline
Rcrescaffold2930228610 Rosmarinic Acid RAS low borderline
Rcrescaffold309020234800 Rosmarinic Acid RAS medium pass
Rcrescaffold31450235550 Rosmarinic Acid RAS medium pass
Rcrescaffold334020239670 Rosmarinic Acid RAS medium pass
Rcrescaffold336940239980 Rosmarinic Acid RAS low borderline
Rcrescaffold62060280740 Rosmarinic Acid RAS medium pass
Rcrescaffold68950290790 Rosmarinic Acid RAS low borderline
Rcrescaffold72730294310 Rosmarinic Acid RAS low borderline
Rcrescaffold755460297360 Rosmarinic Acid RAS medium pass
Rcrescaffold107840005840 Rosmarinic Acid TAT medium pass
Rcrescaffold131420025090 Rosmarinic Acid TAT low borderline
Rcrescaffold1383460058910 Rosmarinic Acid TAT medium pass
Rcrescaffold1385290082860 Rosmarinic Acid TAT medium pass
Rcrescaffold1386280093310 Rosmarinic Acid TAT low borderline
Rcrescaffold1386680096210 Rosmarinic Acid TAT low borderline
Rcrescaffold1387400103030 Rosmarinic Acid TAT medium pass
Rcrescaffold1391410137850 Rosmarinic Acid TAT low borderline
Rcrescaffold1391560142480 Rosmarinic Acid TAT low borderline
Rcrescaffold179260192130 Rosmarinic Acid TAT low borderline
Rcrescaffold234030213140 Rosmarinic Acid TAT medium pass
Rcrescaffold289270227870 Rosmarinic Acid TAT medium pass
Rcrescaffold74780295620 Rosmarinic Acid TAT low borderline
Rcrescaffold7620297860 Rosmarinic Acid TAT medium pass