PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1486
Candidate Protein Records
1104
Pathway-Level Records
2825
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Rcrescaffold267300221480 Steroid DWF4/CYP90B1 low borderline
Rcrescaffold30090231540 Steroid DWF4/CYP90B1 medium borderline
Rcrescaffold35180241710 Steroid DWF4/CYP90B1 low borderline
Rcrescaffold36090243210 Steroid DWF4/CYP90B1 low borderline
Rcrescaffold4130254310 Steroid DWF4/CYP90B1 low borderline
Rcrescaffold43100256460 Steroid DWF4/CYP90B1 low borderline
Rcrescaffold43160256570 Steroid DWF4/CYP90B1 low borderline
Rcrescaffold495320264050 Steroid DWF4/CYP90B1 medium borderline
Rcrescaffold5230267290 Steroid DWF4/CYP90B1 low borderline
Rcrescaffold54670270010 Steroid DWF4/CYP90B1 low borderline
Rcrescaffold64580285490 Steroid DWF4/CYP90B1 low borderline
Rcrescaffold69080291760 Steroid DWF4/CYP90B1 low borderline
Rcrescaffold69080292130 Steroid DWF4/CYP90B1 low borderline
Rcrescaffold75350296450 Steroid DWF4/CYP90B1 low borderline
Rcrescaffold86060306970 Steroid DWF4/CYP90B1 low borderline
Rcrescaffold87360307510 Steroid DWF4/CYP90B1 low borderline
Rcrescaffold1382980056510 Steroid DWF5 medium borderline
Rcrescaffold38990250900 Steroid DWF5 low borderline
Rcrescaffold1385270081920 Steroid DWF7 medium pass
Rcrescaffold107680005260 Steroid FK high pass
Rcrescaffold107680005300 Steroid FK medium pass
Rcrescaffold188020195960 Steroid FK low borderline
Rcrescaffold431710256580 Steroid FK medium pass
Rcrescaffold269060222020 Steroid HYD1 low borderline
Rcrescaffold1355280034390 Steroid ROT3/CYP90C1 medium borderline
Rcrescaffold1384900075610 Steroid ROT3/CYP90C1 medium borderline
Rcrescaffold1386070090580 Steroid ROT3/CYP90C1 medium borderline
Rcrescaffold1391240135150 Steroid ROT3/CYP90C1 medium borderline
Rcrescaffold1391550141460 Steroid ROT3/CYP90C1 medium borderline
Rcrescaffold243690216220 Steroid ROT3/CYP90C1 medium borderline
Rcrescaffold25120218430 Steroid ROT3/CYP90C1 medium borderline
Rcrescaffold45350259620 Steroid ROT3/CYP90C1 medium borderline
Rcrescaffold89750309950 Steroid ROT3/CYP90C1 low borderline
Rcrescaffold90320310460 Steroid ROT3/CYP90C1 medium borderline
Rcrescaffold112360007300 Steroid SMO1/SMO2 medium pass
Rcrescaffold1372390044120 Steroid SMO1/SMO2 medium pass
Rcrescaffold1385220080770 Steroid SMO1/SMO2 medium pass
Rcrescaffold182890193970 Steroid SMO1/SMO2 medium pass
Rcrescaffold102080001150 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold12820018280 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold12820018300 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold12820018400 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold1358900038750 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold1359460038920 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold1383540059300 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold1383800060440 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold1383800060510 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold1386150091240 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold1386430094140 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold1386870097730 Steroid SMT1/SMT2/SMT3 low borderline