PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1486
Candidate Protein Records
1104
Pathway-Level Records
2825
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Rcrescaffold1387300101550 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold1388440110330 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold1389910119380 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold1389910119410 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold1390090121290 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold1391500140500 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold1394460164080 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold1394490164150 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold1394620165820 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold1395340169900 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold166360185890 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold208720202450 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold208720202550 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold21640204690 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold22710210490 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold22860212280 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold237050214680 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold237050214690 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold24050215670 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold24140215810 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold24640216860 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold24640216870 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold24850218050 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold280225950 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold280225960 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold29970230990 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold36180244180 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold36180245090 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold380860249490 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold43780258050 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold5230267550 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold5230267560 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold61350279910 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold640283200 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold82260303670 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold87630307800 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold89750309990 Steroid SMT1/SMT2/SMT3 low borderline
Rcrescaffold89950310340 Steroid SMT1/SMT2/SMT3 medium pass
Rcrescaffold1331130027540 Steroid SQE medium pass
Rcrescaffold1384300063820 Steroid SQE low borderline
Rcrescaffold1385260081350 Steroid SQE medium pass
Rcrescaffold1385390083510 Steroid SQE low borderline
Rcrescaffold1386590095230 Steroid SQE low borderline
Rcrescaffold1390570126000 Steroid SQE low borderline
Rcrescaffold1390950131790 Steroid SQE medium pass
Rcrescaffold1391450138560 Steroid SQE medium pass
Rcrescaffold1392580151700 Steroid SQE medium pass
Rcrescaffold175260189510 Steroid SQE medium pass
Rcrescaffold22710211370 Steroid SQE medium pass
Rcrescaffold138550084450 Steroid SQS/FDFT1 high pass