PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1486
Candidate Protein Records
1104
Pathway-Level Records
2825
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Rcrescaffold6910292200 Flavonoid F3H low borderline
Rcrescaffold80550301810 Flavonoid F3H medium borderline
Rcrescaffold80550301830 Flavonoid F3H medium borderline
Rcrescaffold80550301850 Flavonoid F3H medium borderline
Rcrescaffold91940310920 Flavonoid F3H medium borderline
Rcrescaffold97400314400 Flavonoid F3H medium borderline
Rcrescaffold1390790129730 Flavonoid FLS medium borderline
Rcrescaffold281260226260 Flavonoid FLS medium borderline
Rcrescaffold1383530059290 Flavonoid FNS medium borderline
Rcrescaffold1386730096570 Flavonoid FNS medium borderline
Rcrescaffold1390090121310 Flavonoid FNS medium borderline
Rcrescaffold1390090121340 Flavonoid FNS medium borderline
Rcrescaffold1391240134870 Flavonoid FNS medium borderline
Rcrescaffold1391660144490 Flavonoid FNS medium borderline
Rcrescaffold1394340162910 Flavonoid FNS medium borderline
Rcrescaffold1394460164010 Flavonoid FNS medium borderline
Rcrescaffold1395560171800 Flavonoid FNS medium borderline
Rcrescaffold166950186060 Flavonoid FNS medium borderline
Rcrescaffold178340191370 Flavonoid FNS medium borderline
Rcrescaffold208720202870 Flavonoid FNS medium borderline
Rcrescaffold217190206030 Flavonoid FNS medium borderline
Rcrescaffold217190206040 Flavonoid FNS medium pass
Rcrescaffold22710211530 Flavonoid FNS medium borderline
Rcrescaffold495320264230 Flavonoid FNS medium borderline
Rcrescaffold54670270010 Flavonoid FNS medium borderline
Rcrescaffold56770272130 Flavonoid FNS low borderline
Rcrescaffold64490284860 Flavonoid FNS low borderline
Rcrescaffold64580285470 Flavonoid FNS medium borderline
Rcrescaffold103730003000 Flavonoid IFR high pass
Rcrescaffold1374450045800 Flavonoid IFR low borderline
Rcrescaffold1376600047900 Flavonoid IFR low borderline
Rcrescaffold1384800072920 Flavonoid IFR low borderline
Rcrescaffold1384860073730 Flavonoid IFR high pass
Rcrescaffold138550084520 Flavonoid IFR low borderline
Rcrescaffold1387140100450 Flavonoid IFR low borderline
Rcrescaffold1388340109830 Flavonoid IFR low borderline
Rcrescaffold1389890118650 Flavonoid IFR low borderline
Rcrescaffold1389910119370 Flavonoid IFR medium pass
Rcrescaffold1391970148370 Flavonoid IFR low borderline
Rcrescaffold1394050160360 Flavonoid IFR low borderline
Rcrescaffold1394240162290 Flavonoid IFR low borderline
Rcrescaffold14920179820 Flavonoid IFR high pass
Rcrescaffold15050180290 Flavonoid IFR low borderline
Rcrescaffold163810185100 Flavonoid IFR high pass
Rcrescaffold18260193630 Flavonoid IFR low borderline
Rcrescaffold18260193640 Flavonoid IFR low borderline
Rcrescaffold207660201380 Flavonoid IFR low borderline
Rcrescaffold21640205350 Flavonoid IFR low borderline
Rcrescaffold222410209460 Flavonoid IFR low borderline
Rcrescaffold33300239410 Flavonoid IFR high pass