PlantSME Plant secondary metabolism enzyme database

Rhynchospora breviuscula (rhynchospora_breviuscula)

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Imported from atlas release summary for Rhynchospora breviuscula.

1461
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
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Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 371 12 POD (154) View species results
Terpenoid pathway 357 20 BAHD (128) View species results
Alkaloid pathway 331 20 7DLGT (62) View species results
Flavonoid pathway 221 8 UFGT (121) View species results
Rosmarinic acid pathway 123 7 C4H (53) View species results
Steroid pathway 58 10 SMT1/SMT2/SMT3 (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1221 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 228 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
rhynchospora_breviuscula_mRNA10641 Terpenoid AACT medium borderline
rhynchospora_breviuscula_mRNA11366 Terpenoid AACT medium borderline
rhynchospora_breviuscula_mRNA11368 Terpenoid AACT medium borderline
rhynchospora_breviuscula_mRNA16225 Terpenoid AACT medium borderline
rhynchospora_breviuscula_mRNA20527 Terpenoid AACT low borderline
rhynchospora_breviuscula_mRNA20758 Terpenoid AACT medium borderline
rhynchospora_breviuscula_mRNA21779 Terpenoid AACT medium borderline
rhynchospora_breviuscula_mRNA21850 Terpenoid AACT medium pass
rhynchospora_breviuscula_mRNA23342 Terpenoid AACT low borderline
rhynchospora_breviuscula_mRNA23471 Terpenoid AACT low borderline
rhynchospora_breviuscula_mRNA24306 Terpenoid AACT medium borderline
rhynchospora_breviuscula_mRNA3241 Terpenoid AACT low borderline
rhynchospora_breviuscula_mRNA6327 Terpenoid AACT medium borderline
rhynchospora_breviuscula_mRNA10048 Terpenoid BAHD low borderline
rhynchospora_breviuscula_mRNA10113 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA10250 Terpenoid BAHD low borderline
rhynchospora_breviuscula_mRNA10410 Terpenoid BAHD low borderline
rhynchospora_breviuscula_mRNA10493 Terpenoid BAHD low borderline
rhynchospora_breviuscula_mRNA10773 Terpenoid BAHD low borderline
rhynchospora_breviuscula_mRNA11051 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA11084 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA11094 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA11107 Terpenoid BAHD low borderline
rhynchospora_breviuscula_mRNA11216 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA11218 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA11346 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA11357 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA11470 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA11570 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA11571 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA11572 Terpenoid BAHD low borderline
rhynchospora_breviuscula_mRNA11574 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA11658 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA11684 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA11762 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA11791 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA11962 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA12098 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA12223 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA12526 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA1258 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA12616 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA12704 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA13085 Terpenoid BAHD low borderline
rhynchospora_breviuscula_mRNA13244 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA13399 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA13496 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA13500 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA13618 Terpenoid BAHD medium pass
rhynchospora_breviuscula_mRNA13866 Terpenoid BAHD medium pass