PlantSME Plant secondary metabolism enzyme database

Rhynchospora breviuscula (rhynchospora_breviuscula)

/

Imported from atlas release summary for Rhynchospora breviuscula.

1607
Candidate Protein Records
1461
Pathway-Level Records
3344
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 371 12 POD (154) View species results
Terpenoid pathway 357 20 BAHD (128) View species results
Alkaloid pathway 331 20 7DLGT (62) View species results
Flavonoid pathway 221 8 UFGT (121) View species results
Rosmarinic acid pathway 123 7 C4H (53) View species results
Steroid pathway 58 10 SMT1/SMT2/SMT3 (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1221 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 228 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
rhynchospora_breviuscula_mRNA16875 Phenylpropanoid COMT low borderline
rhynchospora_breviuscula_mRNA1715 Phenylpropanoid COMT low borderline
rhynchospora_breviuscula_mRNA1716 Phenylpropanoid COMT low borderline
rhynchospora_breviuscula_mRNA17619 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA17623 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA17658 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA19370 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA19727 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA3105 Phenylpropanoid COMT low borderline
rhynchospora_breviuscula_mRNA3106 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA3108 Phenylpropanoid COMT low borderline
rhynchospora_breviuscula_mRNA3940 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA4012 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA4013 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA456 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA5012 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA5013 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA651 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA653 Phenylpropanoid COMT low borderline
rhynchospora_breviuscula_mRNA7236 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA739 Phenylpropanoid COMT low borderline
rhynchospora_breviuscula_mRNA750 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA842 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA9361 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA9362 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA9363 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA9991 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA9992 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA9993 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA9994 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA9995 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA9996 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA9997 Phenylpropanoid COMT medium pass
rhynchospora_breviuscula_mRNA11444 Phenylpropanoid CSE medium pass
rhynchospora_breviuscula_mRNA11621 Phenylpropanoid CSE medium pass
rhynchospora_breviuscula_mRNA11716 Phenylpropanoid CSE medium pass
rhynchospora_breviuscula_mRNA11963 Phenylpropanoid CSE medium pass
rhynchospora_breviuscula_mRNA1236 Phenylpropanoid CSE medium pass
rhynchospora_breviuscula_mRNA12413 Phenylpropanoid CSE medium pass
rhynchospora_breviuscula_mRNA12652 Phenylpropanoid CSE medium pass
rhynchospora_breviuscula_mRNA12653 Phenylpropanoid CSE medium pass
rhynchospora_breviuscula_mRNA14527 Phenylpropanoid CSE medium pass
rhynchospora_breviuscula_mRNA14528 Phenylpropanoid CSE medium pass
rhynchospora_breviuscula_mRNA14529 Phenylpropanoid CSE medium pass
rhynchospora_breviuscula_mRNA15395 Phenylpropanoid CSE medium pass
rhynchospora_breviuscula_mRNA15396 Phenylpropanoid CSE medium pass
rhynchospora_breviuscula_mRNA15397 Phenylpropanoid CSE medium pass
rhynchospora_breviuscula_mRNA15569 Phenylpropanoid CSE medium pass
rhynchospora_breviuscula_mRNA15936 Phenylpropanoid CSE medium pass
rhynchospora_breviuscula_mRNA16101 Phenylpropanoid CSE medium pass