PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3598
Candidate Protein Records
3363
Pathway-Level Records
8560
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
Scer04G0041090.1 Alkaloid T3O medium borderline
Scer04G0042270.1 Alkaloid T3O medium borderline
Scer04G0042960.1 Alkaloid T3O medium borderline
Scer04G0042970.1 Alkaloid T3O medium borderline
Scer04G0044380.1 Alkaloid T3O medium borderline
Scer04G0046410.1 Alkaloid T3O medium borderline
Scer04G0046530.1 Alkaloid T3O medium borderline
Scer04G0047290.1 Alkaloid T3O medium borderline
Scer04G0049930.1 Alkaloid T3O medium borderline
Scer04G0050330.1 Alkaloid T3O medium pass
Scer04G0050350.1 Alkaloid T3O medium pass
Scer04G0051180.1 Alkaloid T3O medium borderline
Scer04G0051190.1 Alkaloid T3O medium borderline
Scer04G0051200.1 Alkaloid T3O medium borderline
Scer04G0051790.1 Alkaloid T3O medium borderline
Scer04G0052550.1 Alkaloid T3O medium borderline
Scer04G0052570.1 Alkaloid T3O medium borderline
Scer04G0052790.1 Alkaloid T3O medium borderline
Scer04G0053220.1 Alkaloid T3O medium pass
Scer04G0055560.1 Alkaloid T3O medium pass
Scer04G0055570.1 Alkaloid T3O medium pass
Scer04G0055810.1 Alkaloid T3O medium borderline
Scer04G0056180.1 Alkaloid T3O medium borderline
Scer04G0056240.1 Alkaloid T3O medium borderline
Scer04G0057460.1 Alkaloid T3O medium borderline
Scer04G0059100.1 Alkaloid T3O medium borderline
Scer04G0059120.1 Alkaloid T3O medium borderline
Scer04G0059670.1 Alkaloid T3O medium borderline
Scer04G0061450.1 Alkaloid T3O medium borderline
Scer05G0000350.1 Alkaloid T3O medium borderline
Scer05G0005400.1 Alkaloid T3O medium borderline
Scer05G0006140.1 Alkaloid T3O medium borderline
Scer05G0007130.1 Alkaloid T3O medium borderline
Scer05G0013600.1 Alkaloid T3O medium pass
Scer05G0013710.1 Alkaloid T3O low borderline
Scer05G0014630.1 Alkaloid T3O medium pass
Scer05G0014670.1 Alkaloid T3O medium pass
Scer05G0017810.1 Alkaloid T3O medium borderline
Scer05G0018170.1 Alkaloid T3O medium borderline
Scer05G0018210.1 Alkaloid T3O medium pass
Scer05G0018230.1 Alkaloid T3O medium pass
Scer05G0018330.1 Alkaloid T3O medium pass
Scer05G0021280.1 Alkaloid T3O medium borderline
Scer05G0021350.1 Alkaloid T3O medium borderline
Scer05G0021660.1 Alkaloid T3O medium borderline
Scer05G0021670.1 Alkaloid T3O medium borderline
Scer05G0021680.1 Alkaloid T3O medium borderline
Scer05G0023720.1 Alkaloid T3O medium borderline
Scer05G0023730.1 Alkaloid T3O medium borderline
Scer05G0030810.1 Alkaloid T3O medium borderline