PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3598
Candidate Protein Records
3363
Pathway-Level Records
8560
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Scer07G0022880.1 Alkaloid NMT medium pass
Scer07G0027120.1 Alkaloid NMT medium pass
Scer07G0027140.1 Alkaloid NMT medium pass
Scer07G0027290.1 Alkaloid NMT medium pass
Scer07G0046710.1 Alkaloid NMT medium borderline
Scer07G0046720.1 Alkaloid NMT medium borderline
Scer07G0049390.1 Alkaloid NMT medium borderline
Scer07G0049400.1 Alkaloid NMT medium borderline
Scer07G0049540.1 Alkaloid NMT medium borderline
Scer07G0049560.1 Alkaloid NMT medium borderline
Scer07G0052830.1 Alkaloid NMT medium borderline
Scer07G0054000.1 Alkaloid NMT medium pass
ScerGWHASIY000000080002840.1 Alkaloid NMT medium borderline
ScerGWHASIY000000080004420.1 Alkaloid NMT medium borderline
ScerGWHASIY000000080004910.1 Alkaloid NMT medium pass
ScerGWHASIY000000080012260.1 Alkaloid NMT low borderline
ScerGWHASIY000000080012910.1 Alkaloid NMT medium borderline
ScerGWHASIY000000080014690.1 Alkaloid NMT medium pass
Scer04G0021670.1 Alkaloid ODC medium pass
Scer04G0034510.1 Alkaloid ODC medium pass
Scer05G0032440.1 Alkaloid ODC medium pass
Scer05G0036210.1 Alkaloid ODC medium pass
Scer05G0051750.1 Alkaloid ODC medium pass
Scer07G0005190.1 Alkaloid ODC low borderline
Scer01G0000560.1 Alkaloid PMT medium pass
Scer01G0000580.1 Alkaloid PMT medium pass
Scer01G0000600.1 Alkaloid PMT medium pass
Scer01G0002490.1 Alkaloid PMT medium pass
Scer01G0005510.1 Alkaloid PMT medium pass
Scer01G0010070.1 Alkaloid PMT medium pass
Scer01G0015350.1 Alkaloid PMT medium pass
Scer01G0021540.1 Alkaloid PMT medium pass
Scer01G0021550.1 Alkaloid PMT medium pass
Scer02G0005520.1 Alkaloid PMT medium pass
Scer02G0023380.1 Alkaloid PMT medium borderline
Scer02G0038440.1 Alkaloid PMT medium pass
Scer02G0039630.1 Alkaloid PMT medium pass
Scer02G0050240.1 Alkaloid PMT medium pass
Scer02G0055000.1 Alkaloid PMT medium pass
Scer02G0055100.1 Alkaloid PMT medium pass
Scer02G0055150.1 Alkaloid PMT low borderline
Scer03G0001850.1 Alkaloid PMT medium pass
Scer03G0003990.1 Alkaloid PMT medium pass
Scer03G0011140.1 Alkaloid PMT low borderline
Scer03G0014460.1 Alkaloid PMT medium pass
Scer03G0016490.1 Alkaloid PMT medium pass
Scer03G0016500.1 Alkaloid PMT medium pass
Scer03G0016510.1 Alkaloid PMT medium pass
Scer03G0030090.1 Alkaloid PMT medium pass
Scer03G0033160.1 Alkaloid PMT medium pass