PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3598
Candidate Protein Records
3363
Pathway-Level Records
8560
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Scer03G0038990.1 Alkaloid PMT low borderline
Scer03G0041820.1 Alkaloid PMT medium pass
Scer04G0000520.1 Alkaloid PMT medium pass
Scer04G0004700.1 Alkaloid PMT medium pass
Scer04G0011340.1 Alkaloid PMT medium pass
Scer04G0027130.1 Alkaloid PMT medium pass
Scer04G0035120.1 Alkaloid PMT low borderline
Scer04G0035130.1 Alkaloid PMT low borderline
Scer04G0035140.1 Alkaloid PMT low borderline
Scer04G0035160.1 Alkaloid PMT medium pass
Scer04G0035330.1 Alkaloid PMT medium pass
Scer04G0036280.1 Alkaloid PMT medium pass
Scer04G0036300.1 Alkaloid PMT medium pass
Scer04G0040190.1 Alkaloid PMT medium pass
Scer04G0045750.1 Alkaloid PMT low borderline
Scer04G0049880.1 Alkaloid PMT medium pass
Scer04G0049890.1 Alkaloid PMT medium pass
Scer04G0049900.1 Alkaloid PMT medium pass
Scer04G0050750.1 Alkaloid PMT low borderline
Scer04G0056080.1 Alkaloid PMT medium pass
Scer05G0017420.1 Alkaloid PMT medium borderline
Scer05G0022870.1 Alkaloid PMT medium pass
Scer05G0033730.1 Alkaloid PMT medium pass
Scer05G0037970.1 Alkaloid PMT medium pass
Scer06G0001380.1 Alkaloid PMT low borderline
Scer06G0018880.1 Alkaloid PMT low borderline
Scer06G0025380.1 Alkaloid PMT medium pass
Scer06G0025730.1 Alkaloid PMT low borderline
Scer06G0028960.1 Alkaloid PMT low borderline
Scer06G0042180.1 Alkaloid PMT low borderline
Scer06G0057630.1 Alkaloid PMT low borderline
Scer07G0015580.1 Alkaloid PMT medium borderline
Scer07G0024490.1 Alkaloid PMT medium borderline
Scer07G0029460.1 Alkaloid PMT medium pass
Scer07G0031050.1 Alkaloid PMT medium borderline
Scer07G0033680.1 Alkaloid PMT medium pass
Scer07G0033690.1 Alkaloid PMT medium pass
Scer07G0035950.1 Alkaloid PMT medium pass
Scer07G0042310.1 Alkaloid PMT medium pass
Scer07G0049200.1 Alkaloid PMT medium pass
Scer07G0049210.1 Alkaloid PMT medium pass
Scer07G0049380.1 Alkaloid PMT medium pass
Scer07G0049770.1 Alkaloid PMT medium pass
Scer07G0053910.1 Alkaloid PMT medium pass
Scer07G0054680.1 Alkaloid PMT medium pass
ScerGWHASIY000000080005200.1 Alkaloid PMT low borderline
ScerGWHASIY000000080006010.1 Alkaloid PMT low borderline
ScerGWHASIY000000080011760.1 Alkaloid PMT low borderline
Scer01G0002300.1 Alkaloid PYKS high pass
Scer01G0002310.1 Alkaloid PYKS high pass