PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3363
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Gene Pathway Family Confidence Status
Scer06G0045460.1 Flavonoid ANS/LDOX medium borderline
Scer06G0055590.1 Flavonoid ANS/LDOX medium pass
ScerGWHASIY000000080002640.1 Flavonoid ANS/LDOX medium borderline
ScerGWHASIY000000080014420.1 Flavonoid ANS/LDOX medium borderline
Scer01G0018140.1 Flavonoid C4H low borderline
Scer02G0031270.1 Flavonoid C4H medium borderline
Scer02G0032130.1 Flavonoid C4H medium borderline
Scer03G0019370.1 Flavonoid C4H medium borderline
Scer03G0019380.1 Flavonoid C4H medium borderline
Scer03G0041010.1 Flavonoid C4H medium borderline
Scer05G0018020.1 Flavonoid C4H low borderline
Scer05G0062050.1 Flavonoid C4H medium borderline
Scer06G0059000.1 Flavonoid C4H medium borderline
Scer06G0059020.1 Flavonoid C4H medium borderline
Scer07G0050420.1 Flavonoid C4H low borderline
Scer02G0019840.1 Flavonoid CHI medium pass
Scer05G0054990.1 Flavonoid CHI medium pass
Scer05G0055020.1 Flavonoid CHI medium pass
Scer01G0002300.1 Flavonoid CHS medium pass
Scer01G0002310.1 Flavonoid CHS medium pass
Scer01G0002520.1 Flavonoid CHS medium pass
Scer01G0002560.1 Flavonoid CHS medium pass
Scer01G0018940.1 Flavonoid CHS medium pass
Scer02G0064260.1 Flavonoid CHS medium pass
Scer04G0001940.1 Flavonoid CHS medium pass
Scer04G0041710.1 Flavonoid CHS medium pass
Scer04G0043110.1 Flavonoid CHS medium pass
Scer04G0046850.1 Flavonoid CHS low borderline
Scer04G0056990.1 Flavonoid CHS medium pass
Scer04G0057010.1 Flavonoid CHS medium pass
Scer04G0057110.1 Flavonoid CHS medium pass
Scer05G0006320.1 Flavonoid CHS medium pass
Scer05G0006340.1 Flavonoid CHS medium pass
Scer05G0007620.1 Flavonoid CHS low borderline
Scer05G0041460.1 Flavonoid CHS medium pass
Scer05G0056330.1 Flavonoid CHS medium pass
Scer05G0061440.1 Flavonoid CHS medium pass
Scer06G0014050.1 Flavonoid CHS medium pass
Scer06G0026380.1 Flavonoid CHS medium pass
Scer06G0026430.1 Flavonoid CHS medium pass
Scer06G0039640.1 Flavonoid CHS medium pass
Scer06G0043190.1 Flavonoid CHS medium pass
Scer07G0010630.1 Flavonoid CHS medium pass
Scer07G0049470.1 Flavonoid CHS medium pass
Scer07G0050320.1 Flavonoid CHS medium pass
Scer07G0051010.1 Flavonoid CHS medium pass
Scer07G0051020.1 Flavonoid CHS medium pass
Scer07G0051030.1 Flavonoid CHS medium pass
Scer07G0051400.1 Flavonoid CHS medium pass
Scer07G0051420.1 Flavonoid CHS medium pass