PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3598
Candidate Protein Records
3363
Pathway-Level Records
8560
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Scer02G0064280.1 Rosmarinic Acid C4H low borderline
Scer02G0065520.1 Rosmarinic Acid C4H low borderline
Scer03G0000050.1 Rosmarinic Acid C4H medium pass
Scer03G0000060.1 Rosmarinic Acid C4H medium pass
Scer03G0004060.1 Rosmarinic Acid C4H low borderline
Scer03G0005630.1 Rosmarinic Acid C4H low borderline
Scer03G0005750.1 Rosmarinic Acid C4H low borderline
Scer03G0005760.1 Rosmarinic Acid C4H low borderline
Scer03G0005780.1 Rosmarinic Acid C4H low borderline
Scer03G0006550.1 Rosmarinic Acid C4H medium pass
Scer03G0006590.1 Rosmarinic Acid C4H medium pass
Scer03G0006600.1 Rosmarinic Acid C4H medium pass
Scer03G0006700.1 Rosmarinic Acid C4H medium pass
Scer03G0008770.1 Rosmarinic Acid C4H low borderline
Scer03G0008780.1 Rosmarinic Acid C4H low borderline
Scer03G0008820.1 Rosmarinic Acid C4H low borderline
Scer03G0008910.1 Rosmarinic Acid C4H low borderline
Scer03G0009110.1 Rosmarinic Acid C4H low borderline
Scer03G0009220.1 Rosmarinic Acid C4H low borderline
Scer03G0009230.1 Rosmarinic Acid C4H low borderline
Scer03G0009240.1 Rosmarinic Acid C4H low borderline
Scer03G0009310.1 Rosmarinic Acid C4H low borderline
Scer03G0009320.1 Rosmarinic Acid C4H low borderline
Scer03G0009330.1 Rosmarinic Acid C4H medium pass
Scer03G0009980.1 Rosmarinic Acid C4H low borderline
Scer03G0010060.1 Rosmarinic Acid C4H low borderline
Scer03G0010070.1 Rosmarinic Acid C4H low borderline
Scer03G0010120.1 Rosmarinic Acid C4H low borderline
Scer03G0011080.1 Rosmarinic Acid C4H medium pass
Scer03G0011100.1 Rosmarinic Acid C4H low borderline
Scer03G0011110.1 Rosmarinic Acid C4H medium pass
Scer03G0011120.1 Rosmarinic Acid C4H low borderline
Scer03G0011610.1 Rosmarinic Acid C4H low borderline
Scer03G0011620.1 Rosmarinic Acid C4H low borderline
Scer03G0012120.1 Rosmarinic Acid C4H low borderline
Scer03G0013850.1 Rosmarinic Acid C4H low borderline
Scer03G0014510.1 Rosmarinic Acid C4H low borderline
Scer03G0014760.1 Rosmarinic Acid C4H low borderline
Scer03G0016000.1 Rosmarinic Acid C4H medium pass
Scer03G0017440.1 Rosmarinic Acid C4H low borderline
Scer03G0018940.1 Rosmarinic Acid C4H low borderline
Scer03G0019370.1 Rosmarinic Acid C4H medium pass
Scer03G0019380.1 Rosmarinic Acid C4H medium pass
Scer03G0021580.1 Rosmarinic Acid C4H medium pass
Scer03G0021590.1 Rosmarinic Acid C4H medium pass
Scer03G0021600.1 Rosmarinic Acid C4H medium pass
Scer03G0028230.1 Rosmarinic Acid C4H low borderline
Scer03G0029420.1 Rosmarinic Acid C4H low borderline
Scer03G0029430.1 Rosmarinic Acid C4H low borderline
Scer03G0029440.1 Rosmarinic Acid C4H low borderline