PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3598
Candidate Protein Records
3363
Pathway-Level Records
8560
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Scer03G0029720.1 Rosmarinic Acid C4H low borderline
Scer03G0035190.1 Rosmarinic Acid C4H low borderline
Scer03G0038720.1 Rosmarinic Acid C4H low borderline
Scer03G0039970.1 Rosmarinic Acid C4H medium pass
Scer03G0040010.1 Rosmarinic Acid C4H low borderline
Scer03G0040870.1 Rosmarinic Acid C4H low borderline
Scer03G0040880.1 Rosmarinic Acid C4H low borderline
Scer03G0041010.1 Rosmarinic Acid C4H medium pass
Scer03G0042170.1 Rosmarinic Acid C4H low borderline
Scer03G0044250.1 Rosmarinic Acid C4H low borderline
Scer03G0049460.1 Rosmarinic Acid C4H low borderline
Scer03G0053120.1 Rosmarinic Acid C4H low borderline
Scer03G0054530.1 Rosmarinic Acid C4H medium pass
Scer03G0054540.1 Rosmarinic Acid C4H low borderline
Scer03G0055470.1 Rosmarinic Acid C4H low borderline
Scer04G0000670.1 Rosmarinic Acid C4H medium pass
Scer04G0003790.1 Rosmarinic Acid C4H low borderline
Scer04G0003930.1 Rosmarinic Acid C4H medium pass
Scer04G0005830.1 Rosmarinic Acid C4H low borderline
Scer04G0005870.1 Rosmarinic Acid C4H low borderline
Scer04G0005880.1 Rosmarinic Acid C4H low borderline
Scer04G0007210.1 Rosmarinic Acid C4H low borderline
Scer04G0012640.1 Rosmarinic Acid C4H low borderline
Scer04G0015180.1 Rosmarinic Acid C4H low borderline
Scer04G0021480.1 Rosmarinic Acid C4H low borderline
Scer04G0024600.1 Rosmarinic Acid C4H low borderline
Scer04G0027280.1 Rosmarinic Acid C4H low borderline
Scer04G0028590.1 Rosmarinic Acid C4H medium pass
Scer04G0030400.1 Rosmarinic Acid C4H low borderline
Scer04G0034270.1 Rosmarinic Acid C4H low borderline
Scer04G0034610.1 Rosmarinic Acid C4H low borderline
Scer04G0034660.1 Rosmarinic Acid C4H low borderline
Scer04G0034670.1 Rosmarinic Acid C4H low borderline
Scer04G0034700.1 Rosmarinic Acid C4H low borderline
Scer04G0036330.1 Rosmarinic Acid C4H low borderline
Scer04G0036340.1 Rosmarinic Acid C4H low borderline
Scer04G0036750.1 Rosmarinic Acid C4H low borderline
Scer04G0036760.1 Rosmarinic Acid C4H low borderline
Scer04G0036980.1 Rosmarinic Acid C4H low borderline
Scer04G0037020.1 Rosmarinic Acid C4H low borderline
Scer04G0038100.1 Rosmarinic Acid C4H low borderline
Scer04G0038860.1 Rosmarinic Acid C4H low borderline
Scer04G0039760.1 Rosmarinic Acid C4H medium pass
Scer04G0039820.1 Rosmarinic Acid C4H low borderline
Scer04G0039840.1 Rosmarinic Acid C4H low borderline
Scer04G0039990.1 Rosmarinic Acid C4H medium pass
Scer04G0040730.1 Rosmarinic Acid C4H low borderline
Scer04G0041000.1 Rosmarinic Acid C4H low borderline
Scer04G0041020.1 Rosmarinic Acid C4H medium pass
Scer04G0041070.1 Rosmarinic Acid C4H low borderline