PlantSME Plant secondary metabolism enzyme database

Taxus chinensis (taxus_chinensis)

Imported from atlas release summary for Taxus chinensis.

2956
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 800 19 BAHD (289) View species results
Alkaloid pathway 738 26 7DLGT (127) View species results
Phenylpropanoid pathway 612 13 POD (199) View species results
Flavonoid pathway 372 14 UFGT (201) View species results
Rosmarinic acid pathway 258 7 C4H (132) View species results
Steroid pathway 176 15 CAS (109) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3760 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 667 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX1/CYP85A1
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Gene Pathway Family Confidence Status
TchiHiC_scaffold_100052420.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_100064050.1 Steroid BR6OX1/CYP85A1 low borderline
TchiHiC_scaffold_100064110.1 Steroid BR6OX1/CYP85A1 low borderline
TchiHiC_scaffold_100071730.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_100071780.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_10011650.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_10017080.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_10037860.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_10037980.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_110082080.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_110096440.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_110110700.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_120128670.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_120128720.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_120154880.1 Steroid BR6OX1/CYP85A1 low borderline
TchiHiC_scaffold_120159860.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_120160090.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_120160790.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_120160860.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_20178330.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_20195710.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_40244050.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_40244510.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_50266410.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_50269380.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_50274970.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_50274980.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_50281420.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_50281430.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_50281450.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_50284760.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_60302220.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_60303370.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_60311010.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_60311310.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_60323100.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_70337830.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_70337970.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_70345120.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_70345190.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_70349580.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_70350240.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_70350290.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_70350500.1 Steroid BR6OX1/CYP85A1 medium borderline
TchiHiC_scaffold_90406690.1 Steroid BR6OX1/CYP85A1 low borderline
TchiHiC_scaffold_90408410.1 Steroid BR6OX1/CYP85A1 low borderline
TchiHiC_scaffold_90417120.1 Steroid BR6OX1/CYP85A1 low borderline
TchiHiC_scaffold_90417480.1 Steroid BR6OX1/CYP85A1 low borderline
TchiHiC_scaffold_90417490.1 Steroid BR6OX1/CYP85A1 low borderline
TchiHiC_scaffold_90417510.1 Steroid BR6OX1/CYP85A1 low borderline