PlantSME Plant secondary metabolism enzyme database

Taxus chinensis (taxus_chinensis)

Imported from atlas release summary for Taxus chinensis.

2956
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 800 19 BAHD (289) View species results
Alkaloid pathway 738 26 7DLGT (127) View species results
Phenylpropanoid pathway 612 13 POD (199) View species results
Flavonoid pathway 372 14 UFGT (201) View species results
Rosmarinic acid pathway 258 7 C4H (132) View species results
Steroid pathway 176 15 CAS (109) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3760 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 667 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPD/CYP90A1
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Gene Pathway Family Confidence Status
TchiHiC_scaffold_100071880.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_100075100.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_10014970.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_10017110.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_10019000.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_10038650.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_110084420.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_110100520.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_110100540.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_110103300.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_110117530.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_120146940.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_20178320.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_20179260.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_20191130.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_20198660.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_20198670.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_20198680.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_20198760.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_20205380.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_60297130.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_60302230.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_60311200.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_60327410.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_60327440.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_70337870.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70338080.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70340160.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_70340170.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_70340270.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_70340320.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_70345230.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70345270.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70350060.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70350390.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70350480.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70350550.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70350570.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70350580.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70350590.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70352200.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_70352530.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_80364420.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_80366440.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_80374200.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_80403390.1 Steroid CPD/CYP90A1 low borderline
TchiHiC_scaffold_90414000.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_90414010.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_90414040.1 Steroid CPD/CYP90A1 medium borderline
TchiHiC_scaffold_90414050.1 Steroid CPD/CYP90A1 medium borderline