PlantSME Plant secondary metabolism enzyme database

Taxus chinensis (taxus_chinensis)

Imported from atlas release summary for Taxus chinensis.

3715
Candidate Protein Records
2956
Pathway-Level Records
8306
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 800 19 BAHD (289) View species results
Alkaloid pathway 738 26 7DLGT (127) View species results
Phenylpropanoid pathway 612 13 POD (199) View species results
Flavonoid pathway 372 14 UFGT (201) View species results
Rosmarinic acid pathway 258 7 C4H (132) View species results
Steroid pathway 176 15 CAS (109) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3760 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 667 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
TchiHiC_scaffold_90417490.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90417570.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90417680.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90417710.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90417730.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90417760.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90417770.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90417790.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90417800.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90417820.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90419200.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_90419220.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_90419230.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90419240.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90419290.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90419300.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90419310.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_90419330.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90419360.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_90419480.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90419490.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_90419500.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90420660.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90420750.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90420800.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90420810.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90424330.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90425420.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90426150.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90426160.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_90433340.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90434120.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90435090.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90435110.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90435120.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90435550.1 Rosmarinic Acid C4H medium pass
TchiHiC_scaffold_90436830.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90436850.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90437640.1 Rosmarinic Acid C4H low borderline
TchiHiC_scaffold_90438970.1 Rosmarinic Acid C4H low borderline