PlantSME Plant secondary metabolism enzyme database

Taxus chinensis (taxus_chinensis)

Imported from atlas release summary for Taxus chinensis.

2956
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 800 19 BAHD (289) View species results
Alkaloid pathway 738 26 7DLGT (127) View species results
Phenylpropanoid pathway 612 13 POD (199) View species results
Flavonoid pathway 372 14 UFGT (201) View species results
Rosmarinic acid pathway 258 7 C4H (132) View species results
Steroid pathway 176 15 CAS (109) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3760 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 667 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
TchiHiC_scaffold_10003500.1 Alkaloid G8O/G8H medium pass
TchiHiC_scaffold_100044800.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_100044930.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_100047910.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_100048370.1 Alkaloid G8O/G8H medium pass
TchiHiC_scaffold_100048390.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_100048410.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_100048660.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_100048690.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_100052380.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_100071850.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_100074300.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_100074310.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_100075320.1 Alkaloid G8O/G8H low borderline
TchiHiC_scaffold_10020390.1 Alkaloid G8O/G8H low borderline
TchiHiC_scaffold_10034710.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_10037870.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_10037890.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_10037900.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_10037930.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_10037940.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_10037950.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_10037990.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_10038000.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_10038680.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_10039490.1 Alkaloid G8O/G8H low borderline
TchiHiC_scaffold_110100360.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_110104760.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_110106170.1 Alkaloid G8O/G8H low borderline
TchiHiC_scaffold_110106190.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_110109270.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_110113750.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_120128630.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_120128670.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_120128720.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_120128760.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_120128780.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_120130740.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_120134790.1 Alkaloid G8O/G8H low borderline
TchiHiC_scaffold_120134800.1 Alkaloid G8O/G8H low borderline
TchiHiC_scaffold_120143060.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_120143090.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_120143110.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_120154830.1 Alkaloid G8O/G8H low borderline
TchiHiC_scaffold_120160730.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_120160740.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_120160780.1 Alkaloid G8O/G8H low borderline
TchiHiC_scaffold_120163670.1 Alkaloid G8O/G8H medium borderline
TchiHiC_scaffold_120163680.1 Alkaloid G8O/G8H low borderline
TchiHiC_scaffold_120163690.1 Alkaloid G8O/G8H medium borderline