PlantSME Plant secondary metabolism enzyme database

Taxus chinensis (taxus_chinensis)

Imported from atlas release summary for Taxus chinensis.

3715
Candidate Protein Records
2956
Pathway-Level Records
8306
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 800 19 BAHD (289) View species results
Alkaloid pathway 738 26 7DLGT (127) View species results
Phenylpropanoid pathway 612 13 POD (199) View species results
Flavonoid pathway 372 14 UFGT (201) View species results
Rosmarinic acid pathway 258 7 C4H (132) View species results
Steroid pathway 176 15 CAS (109) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3760 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 667 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
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Protein/Isoform Record Pathway Family Confidence Status Best Target
TchiHiC_scaffold_90406760.1 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
TchiHiC_scaffold_90409410.1 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
TchiHiC_scaffold_90409420.1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
TchiHiC_scaffold_90409580.1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
TchiHiC_scaffold_90417170.1 Phenylpropanoid POD medium pass POD__00024__sp_Q9SCX8_PPA17_ARATH
TchiHiC_scaffold_90420310.1 Phenylpropanoid POD medium pass POD__00024__sp_Q9SCX8_PPA17_ARATH
TchiHiC_scaffold_90420320.1 Phenylpropanoid POD medium pass POD__00024__sp_Q9SCX8_PPA17_ARATH
TchiHiC_scaffold_90421910.1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
TchiHiC_scaffold_90424140.1 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
TchiHiC_scaffold_90424160.1 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
TchiHiC_scaffold_90427270.1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
TchiHiC_scaffold_90428830.1 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
TchiHiC_scaffold_90432620.1 Phenylpropanoid POD low borderline POD__00020__sp_Q9FE01_APX2_ORYSJ
TchiHiC_scaffold_90432670.1 Phenylpropanoid POD low borderline POD__00020__sp_Q9FE01_APX2_ORYSJ
TchiHiC_scaffold_90433160.1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
TchiHiC_scaffold_90433170.1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
TchiHiC_scaffold_90433200.1 Phenylpropanoid POD low borderline POD__00010__sp_P84516_PER1_SORBI
TchiHiC_scaffold_90433210.1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
TchiHiC_scaffold_90433220.1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
TchiHiC_scaffold_90437250.1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE