PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2106
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status
TpraFKJA01001175.10094040.1 Phenylpropanoid 4CL medium pass
TpraFKJA01001569.10103560.1 Phenylpropanoid 4CL medium pass
TpraFKJA01002206.10109910.1 Phenylpropanoid 4CL medium pass
TpraFKJA01006031.10126960.1 Phenylpropanoid 4CL medium pass
TpraFKJA01007083.10130110.1 Phenylpropanoid 4CL medium pass
TpraFKJA01007582.10131590.1 Phenylpropanoid 4CL medium pass
TpraFKJA01010823.10140210.1 Phenylpropanoid 4CL low borderline
TpraFKJA01012066.10143420.1 Phenylpropanoid 4CL medium pass
TpraFKJA01015612.10151170.1 Phenylpropanoid 4CL medium pass
TpraFKJA01021995.10162150.1 Phenylpropanoid 4CL medium pass
TpraFKJA01028921.10172250.1 Phenylpropanoid 4CL medium pass
TpraFKJA01032165.10176260.1 Phenylpropanoid 4CL medium pass
Tpra01G0001940.1 Rosmarinic Acid 4CL low borderline
Tpra01G0016140.1 Rosmarinic Acid 4CL low borderline
Tpra01G0022990.1 Rosmarinic Acid 4CL medium pass
Tpra01G0027200.1 Rosmarinic Acid 4CL medium pass
Tpra02G0010050.1 Rosmarinic Acid 4CL low borderline
Tpra02G0011680.1 Rosmarinic Acid 4CL medium pass
Tpra02G0022900.1 Rosmarinic Acid 4CL medium pass
Tpra02G0030020.1 Rosmarinic Acid 4CL medium pass
Tpra02G0035610.1 Rosmarinic Acid 4CL medium pass
Tpra02G0035630.1 Rosmarinic Acid 4CL medium pass
Tpra02G0036100.1 Rosmarinic Acid 4CL low borderline
Tpra02G0036110.1 Rosmarinic Acid 4CL low borderline
Tpra02G0036120.1 Rosmarinic Acid 4CL medium pass
Tpra03G0005790.1 Rosmarinic Acid 4CL low borderline
Tpra03G0005800.1 Rosmarinic Acid 4CL low borderline
Tpra03G0015560.1 Rosmarinic Acid 4CL low borderline
Tpra03G0017290.1 Rosmarinic Acid 4CL low borderline
Tpra03G0026310.1 Rosmarinic Acid 4CL low borderline
Tpra04G0010500.1 Rosmarinic Acid 4CL medium pass
Tpra04G0013980.1 Rosmarinic Acid 4CL medium pass
Tpra04G0017830.1 Rosmarinic Acid 4CL medium pass
Tpra04G0025240.1 Rosmarinic Acid 4CL low borderline
Tpra04G0027670.1 Rosmarinic Acid 4CL medium pass
Tpra05G0005370.1 Rosmarinic Acid 4CL medium pass
Tpra06G0007020.1 Rosmarinic Acid 4CL medium pass
Tpra06G0010330.1 Rosmarinic Acid 4CL medium pass
Tpra06G0015010.1 Rosmarinic Acid 4CL medium pass
Tpra06G0015020.1 Rosmarinic Acid 4CL medium pass
Tpra06G0016490.1 Rosmarinic Acid 4CL medium pass
Tpra07G0007030.1 Rosmarinic Acid 4CL medium pass
Tpra07G0013700.1 Rosmarinic Acid 4CL low borderline
Tpra07G0013700.2 Rosmarinic Acid 4CL low borderline
Tpra07G0018330.1 Rosmarinic Acid 4CL medium pass
Tpra07G0025990.1 Rosmarinic Acid 4CL low borderline
TpraFKJA01000367.10032270.1 Rosmarinic Acid 4CL medium pass
TpraFKJA01000367.10032280.1 Rosmarinic Acid 4CL medium pass
TpraFKJA01000465.10042310.1 Rosmarinic Acid 4CL medium pass
TpraFKJA01000593.10056280.1 Rosmarinic Acid 4CL medium pass