PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2106
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLH
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Gene Pathway Family Confidence Status
Tpra01G0004230.1 Alkaloid 7DLH medium borderline
Tpra01G0010430.1 Alkaloid 7DLH medium borderline
Tpra01G0013400.1 Alkaloid 7DLH medium borderline
Tpra02G0020410.1 Alkaloid 7DLH low borderline
Tpra02G0022780.1 Alkaloid 7DLH low borderline
Tpra02G0035480.1 Alkaloid 7DLH medium borderline
Tpra03G0003880.1 Alkaloid 7DLH medium borderline
Tpra03G0030070.1 Alkaloid 7DLH medium borderline
Tpra04G0019310.1 Alkaloid 7DLH low borderline
Tpra05G0000130.1 Alkaloid 7DLH medium borderline
Tpra05G0004950.1 Alkaloid 7DLH medium borderline
Tpra06G0012870.1 Alkaloid 7DLH medium borderline
Tpra06G0012880.1 Alkaloid 7DLH medium borderline
Tpra06G0012890.1 Alkaloid 7DLH medium borderline
Tpra07G0028140.1 Alkaloid 7DLH medium borderline
Tpra07G0028150.1 Alkaloid 7DLH medium borderline
Tpra07G0028170.1 Alkaloid 7DLH medium borderline
Tpra07G0028180.1 Alkaloid 7DLH medium borderline
Tpra07G0028190.1 Alkaloid 7DLH medium borderline
Tpra07G0028200.1 Alkaloid 7DLH medium borderline
Tpra07G0028210.1 Alkaloid 7DLH medium borderline
TpraFKJA01000201.10011620.1 Alkaloid 7DLH low borderline
TpraFKJA01000221.10014560.1 Alkaloid 7DLH medium borderline
TpraFKJA01000264.10020230.1 Alkaloid 7DLH medium borderline
TpraFKJA01000276.10022240.1 Alkaloid 7DLH medium borderline
TpraFKJA01000286.10023200.1 Alkaloid 7DLH medium borderline
TpraFKJA01000286.10023220.1 Alkaloid 7DLH medium borderline
TpraFKJA01000286.10023270.1 Alkaloid 7DLH medium borderline
TpraFKJA01000286.10023290.1 Alkaloid 7DLH medium borderline
TpraFKJA01000414.10037060.1 Alkaloid 7DLH medium borderline
TpraFKJA01000426.10038230.1 Alkaloid 7DLH medium borderline
TpraFKJA01000479.10044570.1 Alkaloid 7DLH medium borderline
TpraFKJA01000589.10055900.1 Alkaloid 7DLH medium borderline
TpraFKJA01000605.10058060.1 Alkaloid 7DLH low borderline
TpraFKJA01000969.10084540.1 Alkaloid 7DLH medium borderline
TpraFKJA01001025.10087500.1 Alkaloid 7DLH medium borderline
TpraFKJA01001727.10105460.1 Alkaloid 7DLH low borderline
TpraFKJA01010252.10138820.1 Alkaloid 7DLH medium borderline
TpraFKJA01013166.10146150.1 Alkaloid 7DLH medium borderline
TpraFKJA01019758.10158680.1 Alkaloid 7DLH medium borderline
TpraFKJA01021015.10160720.1 Alkaloid 7DLH medium borderline
TpraFKJA01027734.10170510.1 Alkaloid 7DLH low borderline
TpraFKJA01029376.10172910.1 Alkaloid 7DLH low borderline