PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2106
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
Tpra01G0000860.1 Rosmarinic Acid RAS medium pass
Tpra01G0002470.1 Rosmarinic Acid RAS medium pass
Tpra01G0002510.1 Rosmarinic Acid RAS low borderline
Tpra01G0017420.1 Rosmarinic Acid RAS low borderline
Tpra02G0014050.1 Rosmarinic Acid RAS medium pass
Tpra02G0030390.1 Rosmarinic Acid RAS medium pass
Tpra03G0003230.1 Rosmarinic Acid RAS medium pass
Tpra03G0020810.1 Rosmarinic Acid RAS low borderline
Tpra03G0026800.1 Rosmarinic Acid RAS low borderline
Tpra03G0026800.2 Rosmarinic Acid RAS low borderline
Tpra04G0013280.1 Rosmarinic Acid RAS low borderline
Tpra04G0020980.1 Rosmarinic Acid RAS low borderline
Tpra04G0023730.1 Rosmarinic Acid RAS medium pass
Tpra05G0009850.1 Rosmarinic Acid RAS low borderline
Tpra05G0014790.1 Rosmarinic Acid RAS medium pass
Tpra05G0014810.1 Rosmarinic Acid RAS medium pass
Tpra05G0014820.1 Rosmarinic Acid RAS medium pass
Tpra06G0004510.1 Rosmarinic Acid RAS medium pass
Tpra06G0004530.1 Rosmarinic Acid RAS medium pass
Tpra06G0004540.1 Rosmarinic Acid RAS medium pass
Tpra07G0005160.1 Rosmarinic Acid RAS medium pass
Tpra07G0019210.1 Rosmarinic Acid RAS medium pass
Tpra07G0019700.1 Rosmarinic Acid RAS low borderline
TpraFKJA01000127.10003280.1 Rosmarinic Acid RAS medium pass
TpraFKJA01000186.10009520.1 Rosmarinic Acid RAS low borderline
TpraFKJA01000260.10019790.1 Rosmarinic Acid RAS low borderline
TpraFKJA01000459.10041830.1 Rosmarinic Acid RAS low borderline
TpraFKJA01000479.10044460.1 Rosmarinic Acid RAS low borderline
TpraFKJA01000479.10044470.1 Rosmarinic Acid RAS low borderline
TpraFKJA01000479.10044480.1 Rosmarinic Acid RAS medium pass
TpraFKJA01000479.10044490.1 Rosmarinic Acid RAS medium pass
TpraFKJA01000856.10077900.1 Rosmarinic Acid RAS low borderline
TpraFKJA01002671.10113120.1 Rosmarinic Acid RAS low borderline
TpraFKJA01004878.10122810.1 Rosmarinic Acid RAS low borderline
TpraFKJA01006367.10128080.1 Rosmarinic Acid RAS medium pass