PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2106
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Tpra01G0015540.1 Steroid BR6OX1/CYP85A1 medium borderline
Tpra01G0019910.1 Steroid BR6OX1/CYP85A1 medium borderline
Tpra02G0004940.1 Steroid BR6OX1/CYP85A1 medium borderline
Tpra02G0020040.1 Steroid BR6OX1/CYP85A1 low borderline
Tpra02G0032840.1 Steroid BR6OX1/CYP85A1 medium borderline
Tpra02G0032880.1 Steroid BR6OX1/CYP85A1 medium borderline
Tpra02G0032890.1 Steroid BR6OX1/CYP85A1 medium borderline
Tpra02G0035540.1 Steroid BR6OX1/CYP85A1 low borderline
Tpra03G0006600.1 Steroid BR6OX1/CYP85A1 medium borderline
Tpra03G0006920.1 Steroid BR6OX1/CYP85A1 medium borderline
Tpra03G0016840.1 Steroid BR6OX1/CYP85A1 low borderline
Tpra04G0016300.1 Steroid BR6OX1/CYP85A1 medium borderline
Tpra07G0009530.1 Steroid BR6OX1/CYP85A1 medium borderline
Tpra07G0024550.1 Steroid BR6OX1/CYP85A1 low borderline
Tpra07G0025230.1 Steroid BR6OX1/CYP85A1 medium borderline
TpraFKJA01000260.10019680.1 Steroid BR6OX1/CYP85A1 medium borderline
TpraFKJA01000341.10029910.1 Steroid BR6OX1/CYP85A1 medium borderline
TpraFKJA01000457.10041580.1 Steroid BR6OX1/CYP85A1 medium borderline
TpraFKJA01000534.10049830.1 Steroid BR6OX1/CYP85A1 medium borderline
TpraFKJA01000849.10077440.1 Steroid BR6OX1/CYP85A1 medium borderline
TpraFKJA01002966.10114690.1 Steroid BR6OX1/CYP85A1 low borderline
TpraFKJA01003783.10118610.1 Steroid BR6OX1/CYP85A1 low borderline
TpraFKJA01008554.10134310.1 Steroid BR6OX1/CYP85A1 medium borderline
TpraFKJA01018351.10156170.1 Steroid BR6OX1/CYP85A1 medium borderline
Tpra01G0001280.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra01G0015010.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra01G0015560.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra01G0015930.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra01G0016410.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra01G0018230.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra01G0018240.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra01G0018280.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra01G0018290.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra01G0018420.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra01G0018440.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra01G0026160.1 Steroid BR6OX2/CYP85A2 medium borderline
Tpra01G0031290.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra01G0031300.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra01G0031330.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra02G0000810.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra02G0006240.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra02G0007600.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra02G0007620.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra02G0009510.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra02G0021170.1 Steroid BR6OX2/CYP85A2 medium borderline
Tpra02G0023310.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra02G0029580.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra03G0000310.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra03G0003880.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra03G0006640.1 Steroid BR6OX2/CYP85A2 low borderline