PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2106
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
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Gene Pathway Family Confidence Status
Tpra01G0019060.1 Alkaloid SLS low borderline
Tpra01G0025720.1 Alkaloid SLS medium borderline
Tpra01G0025740.1 Alkaloid SLS medium borderline
Tpra02G0018960.1 Alkaloid SLS medium borderline
Tpra03G0000320.1 Alkaloid SLS medium borderline
Tpra03G0030080.1 Alkaloid SLS medium borderline
Tpra04G0018480.1 Alkaloid SLS medium borderline
Tpra06G0026370.1 Alkaloid SLS medium borderline
Tpra07G0024550.1 Alkaloid SLS medium borderline
Tpra07G0028160.1 Alkaloid SLS medium borderline
Tpra07G0028220.1 Alkaloid SLS medium borderline
Tpra07G0031390.1 Alkaloid SLS medium borderline
Tpra07G0032430.1 Alkaloid SLS medium borderline
TpraFKJA01000162.10006230.1 Alkaloid SLS medium borderline
TpraFKJA01000202.10012060.1 Alkaloid SLS medium borderline
TpraFKJA01000777.10072560.1 Alkaloid SLS medium borderline
TpraFKJA01000895.10080480.1 Alkaloid SLS medium borderline
TpraFKJA01000895.10080500.1 Alkaloid SLS medium borderline
TpraFKJA01000895.10080560.1 Alkaloid SLS medium borderline
TpraFKJA01008749.10134840.1 Alkaloid SLS low borderline
TpraFKJA01019460.10158140.1 Alkaloid SLS medium borderline
TpraFKJA01028112.10171160.1 Alkaloid SLS medium borderline