PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2106
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
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Gene Pathway Family Confidence Status
Tpra01G0002670.1 Alkaloid CODM/T6ODM medium borderline
Tpra01G0013660.1 Alkaloid CODM/T6ODM medium borderline
Tpra01G0015200.1 Alkaloid CODM/T6ODM low borderline
Tpra01G0015220.1 Alkaloid CODM/T6ODM medium borderline
Tpra01G0016260.1 Alkaloid CODM/T6ODM medium borderline
Tpra01G0024100.1 Alkaloid CODM/T6ODM medium borderline
Tpra02G0003440.1 Alkaloid CODM/T6ODM medium borderline
Tpra02G0019310.1 Alkaloid CODM/T6ODM medium pass
Tpra02G0019390.1 Alkaloid CODM/T6ODM medium borderline
Tpra02G0035290.1 Alkaloid CODM/T6ODM medium borderline
Tpra03G0009110.1 Alkaloid CODM/T6ODM medium borderline
Tpra03G0009120.1 Alkaloid CODM/T6ODM medium borderline
Tpra03G0009430.1 Alkaloid CODM/T6ODM medium borderline
Tpra03G0009450.1 Alkaloid CODM/T6ODM medium borderline
Tpra03G0009460.1 Alkaloid CODM/T6ODM medium borderline
Tpra03G0009470.1 Alkaloid CODM/T6ODM medium borderline
Tpra03G0009490.1 Alkaloid CODM/T6ODM medium borderline
Tpra03G0009500.1 Alkaloid CODM/T6ODM medium borderline
Tpra03G0009510.1 Alkaloid CODM/T6ODM medium borderline
Tpra03G0009870.1 Alkaloid CODM/T6ODM medium borderline
Tpra03G0015960.1 Alkaloid CODM/T6ODM medium borderline
Tpra03G0015970.1 Alkaloid CODM/T6ODM medium borderline
Tpra03G0015990.1 Alkaloid CODM/T6ODM medium borderline
Tpra03G0016000.1 Alkaloid CODM/T6ODM medium borderline
Tpra03G0016010.1 Alkaloid CODM/T6ODM medium borderline
Tpra03G0016020.1 Alkaloid CODM/T6ODM low borderline
Tpra03G0016860.1 Alkaloid CODM/T6ODM medium borderline
Tpra03G0028800.1 Alkaloid CODM/T6ODM medium borderline
Tpra03G0029790.1 Alkaloid CODM/T6ODM medium borderline
Tpra03G0030540.1 Alkaloid CODM/T6ODM medium borderline
Tpra03G0033800.1 Alkaloid CODM/T6ODM medium borderline
Tpra04G0001740.1 Alkaloid CODM/T6ODM medium borderline
Tpra04G0001750.1 Alkaloid CODM/T6ODM medium borderline
Tpra04G0012650.1 Alkaloid CODM/T6ODM medium borderline
Tpra04G0019280.1 Alkaloid CODM/T6ODM medium borderline
Tpra04G0019290.1 Alkaloid CODM/T6ODM medium borderline
Tpra04G0019300.1 Alkaloid CODM/T6ODM medium borderline
Tpra04G0019330.1 Alkaloid CODM/T6ODM medium borderline
Tpra04G0019340.1 Alkaloid CODM/T6ODM medium borderline
Tpra04G0024670.1 Alkaloid CODM/T6ODM medium borderline
Tpra05G0009320.1 Alkaloid CODM/T6ODM medium borderline
Tpra06G0003310.1 Alkaloid CODM/T6ODM medium borderline
Tpra06G0025670.1 Alkaloid CODM/T6ODM medium borderline
Tpra07G0001790.1 Alkaloid CODM/T6ODM medium borderline
Tpra07G0004170.1 Alkaloid CODM/T6ODM medium borderline
Tpra07G0004180.1 Alkaloid CODM/T6ODM medium borderline
Tpra07G0008230.1 Alkaloid CODM/T6ODM medium borderline
Tpra07G0009350.1 Alkaloid CODM/T6ODM medium borderline
Tpra07G0023200.1 Alkaloid CODM/T6ODM medium borderline
Tpra07G0030420.1 Alkaloid CODM/T6ODM medium borderline