PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2106
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status
Tpra01G0017230.1 Flavonoid PAL high pass
Tpra01G0030880.1 Flavonoid PAL high pass
Tpra07G0018020.1 Flavonoid PAL medium pass
Tpra07G0018060.1 Flavonoid PAL high pass
TpraFKJA01000244.10018560.1 Flavonoid PAL medium pass
TpraFKJA01000244.10018570.1 Flavonoid PAL medium pass
TpraFKJA01000244.10018590.1 Flavonoid PAL high pass
TpraFKJA01000244.10018600.1 Flavonoid PAL high pass
TpraFKJA01000523.10048670.1 Flavonoid PAL low borderline
TpraFKJA01000567.10053470.1 Flavonoid PAL high pass
TpraFKJA01000675.10063820.1 Flavonoid PAL high pass
TpraFKJA01009981.10138000.1 Flavonoid PAL medium pass
Tpra01G0017230.1 Phenylpropanoid PAL high pass
Tpra01G0030880.1 Phenylpropanoid PAL high pass
Tpra07G0018020.1 Phenylpropanoid PAL medium pass
Tpra07G0018060.1 Phenylpropanoid PAL high pass
TpraFKJA01000244.10018560.1 Phenylpropanoid PAL medium pass
TpraFKJA01000244.10018570.1 Phenylpropanoid PAL medium pass
TpraFKJA01000244.10018590.1 Phenylpropanoid PAL high pass
TpraFKJA01000244.10018600.1 Phenylpropanoid PAL high pass
TpraFKJA01000523.10048670.1 Phenylpropanoid PAL low borderline
TpraFKJA01000567.10053470.1 Phenylpropanoid PAL high pass
TpraFKJA01000675.10063820.1 Phenylpropanoid PAL high pass
TpraFKJA01009981.10138000.1 Phenylpropanoid PAL medium pass
Tpra01G0017230.1 Rosmarinic Acid PAL high pass
Tpra01G0030880.1 Rosmarinic Acid PAL high pass
Tpra07G0018020.1 Rosmarinic Acid PAL medium pass
Tpra07G0018060.1 Rosmarinic Acid PAL high pass
TpraFKJA01000244.10018560.1 Rosmarinic Acid PAL medium pass
TpraFKJA01000244.10018570.1 Rosmarinic Acid PAL medium pass
TpraFKJA01000244.10018590.1 Rosmarinic Acid PAL high pass
TpraFKJA01000244.10018600.1 Rosmarinic Acid PAL high pass
TpraFKJA01000523.10048670.1 Rosmarinic Acid PAL low borderline
TpraFKJA01000567.10053470.1 Rosmarinic Acid PAL high pass
TpraFKJA01000675.10063820.1 Rosmarinic Acid PAL high pass
TpraFKJA01009981.10138000.1 Rosmarinic Acid PAL medium pass