PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2106
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Tpra01G0018430.1 Rosmarinic Acid C4H medium pass
Tpra01G0018440.1 Rosmarinic Acid C4H low borderline
Tpra01G0019910.1 Rosmarinic Acid C4H low borderline
Tpra01G0022590.1 Rosmarinic Acid C4H low borderline
Tpra01G0022650.1 Rosmarinic Acid C4H low borderline
Tpra01G0022660.1 Rosmarinic Acid C4H low borderline
Tpra01G0025090.1 Rosmarinic Acid C4H low borderline
Tpra01G0025720.1 Rosmarinic Acid C4H low borderline
Tpra01G0026160.1 Rosmarinic Acid C4H low borderline
Tpra01G0028190.1 Rosmarinic Acid C4H low borderline
Tpra01G0031290.1 Rosmarinic Acid C4H low borderline
Tpra01G0031300.1 Rosmarinic Acid C4H low borderline
Tpra01G0031310.1 Rosmarinic Acid C4H low borderline
Tpra01G0031330.1 Rosmarinic Acid C4H low borderline
Tpra02G0000810.1 Rosmarinic Acid C4H medium pass
Tpra02G0000820.1 Rosmarinic Acid C4H low borderline
Tpra02G0001760.1 Rosmarinic Acid C4H low borderline
Tpra02G0004940.1 Rosmarinic Acid C4H medium pass
Tpra02G0006230.1 Rosmarinic Acid C4H medium pass
Tpra02G0006240.1 Rosmarinic Acid C4H low borderline
Tpra02G0006250.1 Rosmarinic Acid C4H low borderline
Tpra02G0006260.1 Rosmarinic Acid C4H medium pass
Tpra02G0009510.1 Rosmarinic Acid C4H low borderline
Tpra02G0012540.1 Rosmarinic Acid C4H low borderline
Tpra02G0012640.1 Rosmarinic Acid C4H low borderline
Tpra02G0012660.1 Rosmarinic Acid C4H low borderline
Tpra02G0014170.1 Rosmarinic Acid C4H medium pass
Tpra02G0017890.1 Rosmarinic Acid C4H low borderline
Tpra02G0021170.1 Rosmarinic Acid C4H low borderline
Tpra02G0029580.1 Rosmarinic Acid C4H low borderline
Tpra02G0032840.1 Rosmarinic Acid C4H low borderline
Tpra02G0032880.1 Rosmarinic Acid C4H low borderline
Tpra02G0032890.1 Rosmarinic Acid C4H low borderline
Tpra02G0032910.1 Rosmarinic Acid C4H low borderline
Tpra02G0033020.1 Rosmarinic Acid C4H low borderline
Tpra02G0035480.1 Rosmarinic Acid C4H low borderline
Tpra03G0000320.1 Rosmarinic Acid C4H low borderline
Tpra03G0000500.1 Rosmarinic Acid C4H medium pass
Tpra03G0004950.1 Rosmarinic Acid C4H medium pass
Tpra03G0004960.1 Rosmarinic Acid C4H low borderline
Tpra03G0004980.1 Rosmarinic Acid C4H medium pass
Tpra03G0006600.1 Rosmarinic Acid C4H low borderline
Tpra03G0006640.1 Rosmarinic Acid C4H medium pass
Tpra03G0011540.1 Rosmarinic Acid C4H low borderline
Tpra03G0012950.1 Rosmarinic Acid C4H low borderline
Tpra03G0012960.1 Rosmarinic Acid C4H low borderline
Tpra03G0012970.1 Rosmarinic Acid C4H medium pass
Tpra03G0012980.1 Rosmarinic Acid C4H medium pass
Tpra03G0012990.1 Rosmarinic Acid C4H medium pass
Tpra03G0013000.1 Rosmarinic Acid C4H low borderline