PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2106
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
Reset
Gene Pathway Family Confidence Status
Tpra01G0001630.1 Alkaloid T3O medium borderline
Tpra01G0015010.1 Alkaloid T3O medium borderline
Tpra01G0015540.1 Alkaloid T3O medium pass
Tpra01G0015560.1 Alkaloid T3O low borderline
Tpra01G0015930.1 Alkaloid T3O medium borderline
Tpra01G0015940.1 Alkaloid T3O medium borderline
Tpra01G0015950.1 Alkaloid T3O medium borderline
Tpra01G0016160.1 Alkaloid T3O low borderline
Tpra01G0016180.1 Alkaloid T3O low borderline
Tpra01G0016410.1 Alkaloid T3O low borderline
Tpra01G0018220.1 Alkaloid T3O medium borderline
Tpra01G0018230.1 Alkaloid T3O medium borderline
Tpra01G0018240.1 Alkaloid T3O medium borderline
Tpra01G0018250.1 Alkaloid T3O medium borderline
Tpra01G0018260.1 Alkaloid T3O medium borderline
Tpra01G0018270.1 Alkaloid T3O medium borderline
Tpra01G0018280.1 Alkaloid T3O medium borderline
Tpra01G0018290.1 Alkaloid T3O medium borderline
Tpra01G0018300.1 Alkaloid T3O medium borderline
Tpra01G0018320.1 Alkaloid T3O medium borderline
Tpra01G0018340.1 Alkaloid T3O medium borderline
Tpra01G0018370.1 Alkaloid T3O medium borderline
Tpra01G0018380.1 Alkaloid T3O medium borderline
Tpra01G0018390.1 Alkaloid T3O medium borderline
Tpra01G0018400.1 Alkaloid T3O medium borderline
Tpra01G0018410.1 Alkaloid T3O medium borderline
Tpra01G0018420.1 Alkaloid T3O medium borderline
Tpra01G0018430.1 Alkaloid T3O medium borderline
Tpra01G0018440.1 Alkaloid T3O medium borderline
Tpra01G0022590.1 Alkaloid T3O medium borderline
Tpra01G0022650.1 Alkaloid T3O medium borderline
Tpra01G0025090.1 Alkaloid T3O medium pass
Tpra01G0031300.1 Alkaloid T3O medium borderline
Tpra02G0004940.1 Alkaloid T3O medium borderline
Tpra02G0006230.1 Alkaloid T3O medium borderline
Tpra02G0006250.1 Alkaloid T3O medium borderline
Tpra02G0006260.1 Alkaloid T3O medium borderline
Tpra02G0007600.1 Alkaloid T3O low borderline
Tpra02G0007620.1 Alkaloid T3O low borderline
Tpra02G0009510.1 Alkaloid T3O medium borderline
Tpra02G0012640.1 Alkaloid T3O medium pass
Tpra02G0014170.1 Alkaloid T3O medium borderline
Tpra03G0000310.1 Alkaloid T3O low borderline
Tpra03G0000500.1 Alkaloid T3O medium borderline
Tpra03G0004950.1 Alkaloid T3O medium borderline
Tpra03G0004980.1 Alkaloid T3O medium borderline
Tpra03G0006920.1 Alkaloid T3O medium pass
Tpra03G0010850.1 Alkaloid T3O medium pass
Tpra03G0017670.1 Alkaloid T3O medium borderline
Tpra03G0019580.1 Alkaloid T3O medium borderline