PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2106
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Tpra03G0023640.1 Alkaloid T3O medium borderline
Tpra03G0023750.1 Alkaloid T3O medium pass
Tpra03G0028130.1 Alkaloid T3O medium borderline
Tpra03G0030170.1 Alkaloid T3O medium borderline
Tpra03G0033570.1 Alkaloid T3O medium borderline
Tpra04G0000630.1 Alkaloid T3O medium borderline
Tpra04G0000640.1 Alkaloid T3O medium borderline
Tpra04G0000700.1 Alkaloid T3O low borderline
Tpra04G0000710.1 Alkaloid T3O medium pass
Tpra04G0000720.1 Alkaloid T3O low borderline
Tpra04G0000730.1 Alkaloid T3O medium pass
Tpra04G0001580.1 Alkaloid T3O medium borderline
Tpra04G0007230.1 Alkaloid T3O medium borderline
Tpra04G0010320.1 Alkaloid T3O low borderline
Tpra04G0015120.1 Alkaloid T3O medium borderline
Tpra04G0016290.1 Alkaloid T3O medium pass
Tpra04G0016300.1 Alkaloid T3O medium pass
Tpra04G0023130.1 Alkaloid T3O medium borderline
Tpra04G0026620.1 Alkaloid T3O medium borderline
Tpra04G0030690.1 Alkaloid T3O medium borderline
Tpra04G0030700.1 Alkaloid T3O medium borderline
Tpra04G0030710.1 Alkaloid T3O medium borderline
Tpra04G0030740.1 Alkaloid T3O medium borderline
Tpra04G0031110.1 Alkaloid T3O medium borderline
Tpra05G0001140.1 Alkaloid T3O medium pass
Tpra05G0004080.1 Alkaloid T3O medium borderline
Tpra05G0006850.1 Alkaloid T3O medium borderline
Tpra05G0006870.1 Alkaloid T3O medium borderline
Tpra05G0006880.1 Alkaloid T3O medium borderline
Tpra05G0006890.1 Alkaloid T3O medium borderline
Tpra05G0012010.1 Alkaloid T3O medium pass
Tpra06G0008840.1 Alkaloid T3O medium borderline
Tpra06G0008850.1 Alkaloid T3O medium borderline
Tpra06G0009060.1 Alkaloid T3O medium borderline
Tpra06G0009170.1 Alkaloid T3O medium borderline
Tpra06G0009260.1 Alkaloid T3O medium borderline
Tpra06G0009280.1 Alkaloid T3O medium borderline
Tpra06G0015420.1 Alkaloid T3O medium pass
Tpra06G0016740.1 Alkaloid T3O low borderline
Tpra06G0016840.1 Alkaloid T3O low borderline
Tpra06G0018090.1 Alkaloid T3O medium pass
Tpra06G0022970.1 Alkaloid T3O medium borderline
Tpra06G0024450.1 Alkaloid T3O medium borderline
Tpra06G0025610.1 Alkaloid T3O medium pass
Tpra07G0008100.1 Alkaloid T3O medium pass
Tpra07G0010330.1 Alkaloid T3O medium borderline
Tpra07G0011760.1 Alkaloid T3O medium pass
Tpra07G0014100.1 Alkaloid T3O medium borderline
Tpra07G0016310.1 Alkaloid T3O medium pass
Tpra07G0019860.1 Alkaloid T3O medium borderline