PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2106
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Tpra07G0019880.1 Alkaloid T3O medium borderline
Tpra07G0024020.1 Alkaloid T3O medium pass
Tpra07G0024050.1 Alkaloid T3O low borderline
Tpra07G0025220.1 Alkaloid T3O medium pass
Tpra07G0028990.1 Alkaloid T3O medium borderline
Tpra07G0034300.1 Alkaloid T3O medium borderline
Tpra07G0034490.1 Alkaloid T3O medium pass
Tpra07G0034590.1 Alkaloid T3O low borderline
TpraFKJA01000171.10007100.1 Alkaloid T3O medium pass
TpraFKJA01000190.10010010.1 Alkaloid T3O medium borderline
TpraFKJA01000190.10010020.1 Alkaloid T3O medium borderline
TpraFKJA01000207.10013300.1 Alkaloid T3O medium pass
TpraFKJA01000242.10018290.1 Alkaloid T3O medium pass
TpraFKJA01000242.10018300.1 Alkaloid T3O high pass
TpraFKJA01000260.10019680.1 Alkaloid T3O low borderline
TpraFKJA01000286.10023280.1 Alkaloid T3O low borderline
TpraFKJA01000299.10024300.1 Alkaloid T3O medium pass
TpraFKJA01000333.10028620.1 Alkaloid T3O medium borderline
TpraFKJA01000333.10028630.1 Alkaloid T3O medium borderline
TpraFKJA01000337.10029260.1 Alkaloid T3O medium borderline
TpraFKJA01000337.10029300.1 Alkaloid T3O medium borderline
TpraFKJA01000337.10029310.1 Alkaloid T3O medium borderline
TpraFKJA01000338.10029690.1 Alkaloid T3O medium pass
TpraFKJA01000457.10041580.1 Alkaloid T3O medium pass
TpraFKJA01000468.10043040.1 Alkaloid T3O medium borderline
TpraFKJA01000508.10046820.1 Alkaloid T3O medium borderline
TpraFKJA01000530.10049450.1 Alkaloid T3O medium pass
TpraFKJA01000534.10049830.1 Alkaloid T3O medium pass
TpraFKJA01000618.10058990.1 Alkaloid T3O medium borderline
TpraFKJA01000618.10059000.1 Alkaloid T3O medium borderline
TpraFKJA01000618.10059010.1 Alkaloid T3O medium borderline
TpraFKJA01000643.10060890.1 Alkaloid T3O medium borderline
TpraFKJA01000663.10062760.1 Alkaloid T3O medium pass
TpraFKJA01000686.10064820.1 Alkaloid T3O medium borderline
TpraFKJA01000716.10067040.1 Alkaloid T3O medium borderline
TpraFKJA01000748.10069710.1 Alkaloid T3O low borderline
TpraFKJA01000754.10070240.1 Alkaloid T3O medium borderline
TpraFKJA01000812.10074760.1 Alkaloid T3O medium pass
TpraFKJA01000836.10076410.1 Alkaloid T3O medium pass
TpraFKJA01000849.10077440.1 Alkaloid T3O medium pass
TpraFKJA01000849.10077450.1 Alkaloid T3O medium pass
TpraFKJA01000890.10080190.1 Alkaloid T3O medium borderline
TpraFKJA01000890.10080200.1 Alkaloid T3O medium borderline
TpraFKJA01000911.10081430.1 Alkaloid T3O medium borderline
TpraFKJA01000956.10083730.1 Alkaloid T3O medium borderline
TpraFKJA01000956.10083740.1 Alkaloid T3O medium borderline
TpraFKJA01000956.10083750.1 Alkaloid T3O medium borderline
TpraFKJA01000990.10085650.1 Alkaloid T3O medium borderline
TpraFKJA01000995.10085870.1 Alkaloid T3O medium borderline
TpraFKJA01001017.10087100.1 Alkaloid T3O medium borderline