PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2106
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
TpraFKJA01001142.10092710.1 Alkaloid T3O low borderline
TpraFKJA01001176.10094080.1 Alkaloid T3O medium pass
TpraFKJA01001559.10103450.1 Alkaloid T3O medium pass
TpraFKJA01001831.10106640.1 Alkaloid T3O medium borderline
TpraFKJA01002401.10111490.1 Alkaloid T3O medium borderline
TpraFKJA01002853.10114090.1 Alkaloid T3O medium pass
TpraFKJA01002947.10114540.1 Alkaloid T3O medium borderline
TpraFKJA01002961.10114660.1 Alkaloid T3O medium borderline
TpraFKJA01004178.10120250.1 Alkaloid T3O medium borderline
TpraFKJA01005166.10123820.1 Alkaloid T3O low borderline
TpraFKJA01007084.10130120.1 Alkaloid T3O low borderline
TpraFKJA01008650.10134520.1 Alkaloid T3O medium borderline
TpraFKJA01010616.10139730.1 Alkaloid T3O medium borderline
TpraFKJA01014477.10148900.1 Alkaloid T3O medium borderline
TpraFKJA01014542.10149010.1 Alkaloid T3O medium borderline
TpraFKJA01014578.10149050.1 Alkaloid T3O low borderline
TpraFKJA01014880.10149700.1 Alkaloid T3O low borderline
TpraFKJA01017087.10153950.1 Alkaloid T3O medium borderline
TpraFKJA01018132.10155870.1 Alkaloid T3O medium borderline
TpraFKJA01018351.10156170.1 Alkaloid T3O low borderline
TpraFKJA01020446.10159890.1 Alkaloid T3O medium borderline
TpraFKJA01020482.10159970.1 Alkaloid T3O medium borderline
TpraFKJA01022756.10163240.1 Alkaloid T3O medium borderline
TpraFKJA01028493.10171750.1 Alkaloid T3O medium pass
TpraFKJA01029118.10172560.1 Alkaloid T3O low borderline
TpraFKJA01038124.10182820.1 Alkaloid T3O medium borderline