PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2106
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
Tpra04G0023720.1 Flavonoid UFGT high pass
Tpra06G0000710.1 Flavonoid UFGT high pass
Tpra06G0000860.1 Flavonoid UFGT medium pass
Tpra06G0014510.1 Flavonoid UFGT high pass
Tpra06G0018960.1 Flavonoid UFGT medium pass
Tpra06G0018990.1 Flavonoid UFGT medium pass
Tpra06G0019010.1 Flavonoid UFGT medium pass
Tpra06G0019030.1 Flavonoid UFGT medium pass
Tpra06G0021180.1 Flavonoid UFGT high pass
Tpra06G0021830.1 Flavonoid UFGT medium pass
Tpra06G0021840.1 Flavonoid UFGT medium pass
Tpra06G0021860.1 Flavonoid UFGT high pass
Tpra06G0021870.1 Flavonoid UFGT medium pass
Tpra06G0021900.1 Flavonoid UFGT low borderline
Tpra06G0021980.1 Flavonoid UFGT medium pass
Tpra06G0022860.1 Flavonoid UFGT medium pass
Tpra06G0023400.1 Flavonoid UFGT high pass
Tpra07G0003770.1 Flavonoid UFGT medium pass
Tpra07G0003780.1 Flavonoid UFGT low borderline
Tpra07G0004210.1 Flavonoid UFGT medium pass
Tpra07G0018620.1 Flavonoid UFGT high pass
Tpra07G0018630.1 Flavonoid UFGT high pass
Tpra07G0028430.1 Flavonoid UFGT medium pass
Tpra07G0030520.1 Flavonoid UFGT high pass
Tpra07G0030530.1 Flavonoid UFGT medium pass
Tpra07G0030550.1 Flavonoid UFGT high pass
Tpra07G0030560.1 Flavonoid UFGT high pass
Tpra07G0030570.1 Flavonoid UFGT medium pass
Tpra07G0030580.1 Flavonoid UFGT high pass
Tpra07G0030590.1 Flavonoid UFGT high pass
Tpra07G0030600.1 Flavonoid UFGT medium pass
Tpra07G0030610.1 Flavonoid UFGT low borderline
Tpra07G0034390.1 Flavonoid UFGT medium pass
TpraFKJA01000089.10001680.1 Flavonoid UFGT medium pass
TpraFKJA01000089.10001690.1 Flavonoid UFGT high pass
TpraFKJA01000089.10001710.1 Flavonoid UFGT medium pass
TpraFKJA01000089.10001750.1 Flavonoid UFGT medium pass
TpraFKJA01000127.10003500.1 Flavonoid UFGT high pass
TpraFKJA01000127.10003510.1 Flavonoid UFGT high pass
TpraFKJA01000186.10009650.1 Flavonoid UFGT medium pass
TpraFKJA01000201.10011760.1 Flavonoid UFGT medium pass
TpraFKJA01000201.10011770.1 Flavonoid UFGT medium pass
TpraFKJA01000201.10011780.1 Flavonoid UFGT medium pass
TpraFKJA01000201.10011800.1 Flavonoid UFGT medium pass
TpraFKJA01000201.10011820.1 Flavonoid UFGT medium pass
TpraFKJA01000242.10018400.1 Flavonoid UFGT high pass
TpraFKJA01000332.10028360.1 Flavonoid UFGT high pass
TpraFKJA01000414.10036850.1 Flavonoid UFGT high pass
TpraFKJA01000414.10036870.1 Flavonoid UFGT medium pass
TpraFKJA01000416.10037550.1 Flavonoid UFGT medium pass