PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2510
Candidate Protein Records
2106
Pathway-Level Records
5331
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
TpraFKJA01000162.10006230.1 Flavonoid FNS medium borderline
TpraFKJA01000186.10009610.1 Flavonoid FNS medium borderline
TpraFKJA01000242.10018270.1 Flavonoid FNS medium borderline
TpraFKJA01000242.10018300.1 Flavonoid FNS medium borderline
TpraFKJA01000274.10021750.1 Flavonoid FNS medium borderline
TpraFKJA01000286.10023300.1 Flavonoid FNS low borderline
TpraFKJA01000415.10037170.1 Flavonoid FNS medium borderline
TpraFKJA01000415.10037180.1 Flavonoid FNS medium borderline
TpraFKJA01000597.10056940.1 Flavonoid FNS medium borderline
TpraFKJA01000684.10064680.1 Flavonoid FNS medium borderline
TpraFKJA01000686.10064800.1 Flavonoid FNS medium borderline
TpraFKJA01000686.10064810.1 Flavonoid FNS medium borderline
TpraFKJA01000777.10072560.1 Flavonoid FNS medium borderline
TpraFKJA01000812.10074730.1 Flavonoid FNS medium borderline
TpraFKJA01000849.10077440.1 Flavonoid FNS medium borderline
TpraFKJA01000865.10078610.1 Flavonoid FNS low borderline
TpraFKJA01001176.10094080.1 Flavonoid FNS medium borderline
TpraFKJA01001630.10104330.1 Flavonoid FNS medium borderline
TpraFKJA01001632.10104360.1 Flavonoid FNS medium pass
TpraFKJA01005444.10124810.1 Flavonoid FNS medium borderline
TpraFKJA01006767.10129300.1 Flavonoid FNS medium borderline
TpraFKJA01010616.10139720.1 Flavonoid FNS medium borderline
TpraFKJA01014618.10149160.1 Flavonoid FNS medium borderline
TpraFKJA01014712.10149350.1 Flavonoid FNS medium borderline
TpraFKJA01015930.10151900.1 Flavonoid FNS medium borderline
TpraFKJA01021476.10161450.1 Flavonoid FNS medium borderline
TpraFKJA01030517.10174360.1 Flavonoid FNS medium borderline
TpraFKJA01039053.10183780.1 Flavonoid FNS medium borderline
Tpra01G0013070.1 Flavonoid IFR low borderline
Tpra01G0029150.1 Flavonoid IFR low borderline
Tpra02G0012970.1 Flavonoid IFR high pass
Tpra02G0013000.1 Flavonoid IFR high pass
Tpra02G0013010.1 Flavonoid IFR high pass
Tpra02G0013020.1 Flavonoid IFR high pass
Tpra02G0015280.1 Flavonoid IFR high pass
Tpra02G0018550.1 Flavonoid IFR low borderline
Tpra02G0023600.1 Flavonoid IFR low borderline
Tpra03G0003400.1 Flavonoid IFR low borderline
Tpra03G0005660.1 Flavonoid IFR low borderline
Tpra03G0010050.1 Flavonoid IFR low borderline
Tpra03G0010220.1 Flavonoid IFR low borderline
Tpra03G0016180.1 Flavonoid IFR low borderline
Tpra03G0018240.1 Flavonoid IFR low borderline
Tpra03G0022770.1 Flavonoid IFR low borderline
Tpra03G0032860.1 Flavonoid IFR high pass
Tpra03G0032870.1 Flavonoid IFR high pass
Tpra03G0034520.1 Flavonoid IFR high pass
Tpra03G0034530.1 Flavonoid IFR medium pass
Tpra04G0001850.1 Flavonoid IFR low borderline
Tpra04G0010820.1 Flavonoid IFR high pass