PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2510
Candidate Protein Records
2106
Pathway-Level Records
5331
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
TpraFKJA01001048.10088720.1 Phenylpropanoid COMT medium pass
TpraFKJA01001048.10088730.1 Phenylpropanoid COMT medium pass
TpraFKJA01001048.10088740.1 Phenylpropanoid COMT medium pass
TpraFKJA01001048.10088750.1 Phenylpropanoid COMT medium pass
TpraFKJA01001062.10089510.1 Phenylpropanoid COMT low borderline
TpraFKJA01001077.10090150.1 Phenylpropanoid COMT medium pass
TpraFKJA01001077.10090170.1 Phenylpropanoid COMT low borderline
TpraFKJA01001077.10090180.1 Phenylpropanoid COMT medium pass
TpraFKJA01001401.10100520.1 Phenylpropanoid COMT low borderline
TpraFKJA01001743.10105620.1 Phenylpropanoid COMT medium pass
TpraFKJA01001764.10105880.1 Phenylpropanoid COMT medium pass
TpraFKJA01002281.10110450.1 Phenylpropanoid COMT medium pass
TpraFKJA01002482.10112030.1 Phenylpropanoid COMT medium pass
TpraFKJA01002566.10112520.1 Phenylpropanoid COMT low borderline
TpraFKJA01002859.10114140.1 Phenylpropanoid COMT medium pass
TpraFKJA01003133.10115500.1 Phenylpropanoid COMT medium pass
TpraFKJA01003248.10116200.1 Phenylpropanoid COMT low borderline
TpraFKJA01004706.10122230.1 Phenylpropanoid COMT medium pass
TpraFKJA01005085.10123610.1 Phenylpropanoid COMT medium pass
TpraFKJA01005363.10124600.1 Phenylpropanoid COMT low borderline
TpraFKJA01007531.10131400.1 Phenylpropanoid COMT medium pass
TpraFKJA01007531.10131410.1 Phenylpropanoid COMT medium pass
TpraFKJA01008358.10133800.1 Phenylpropanoid COMT low borderline
TpraFKJA01010900.10140440.1 Phenylpropanoid COMT medium pass
TpraFKJA01012655.10144820.1 Phenylpropanoid COMT medium pass
TpraFKJA01022239.10162540.1 Phenylpropanoid COMT medium pass
TpraFKJA01022907.10163480.1 Phenylpropanoid COMT medium pass
TpraFKJA01023033.10163670.1 Phenylpropanoid COMT low borderline
TpraFKJA01023720.10164810.1 Phenylpropanoid COMT medium pass
TpraFKJA01026172.10168390.1 Phenylpropanoid COMT medium pass
TpraFKJA01029702.10173330.1 Phenylpropanoid COMT low borderline
TpraFKJA01037026.10181820.1 Phenylpropanoid COMT medium pass
Tpra01G0002580.1 Phenylpropanoid CSE medium pass
Tpra01G0005050.1 Phenylpropanoid CSE medium pass
Tpra01G0011630.1 Phenylpropanoid CSE medium pass
Tpra01G0013060.1 Phenylpropanoid CSE medium pass
Tpra01G0014340.1 Phenylpropanoid CSE medium pass
Tpra01G0017070.1 Phenylpropanoid CSE low borderline
Tpra01G0021220.1 Phenylpropanoid CSE medium pass
Tpra01G0022530.1 Phenylpropanoid CSE medium pass
Tpra01G0022540.1 Phenylpropanoid CSE medium pass
Tpra01G0024860.1 Phenylpropanoid CSE medium pass
Tpra01G0028170.1 Phenylpropanoid CSE low borderline
Tpra01G0030610.1 Phenylpropanoid CSE low borderline
Tpra01G0031940.1 Phenylpropanoid CSE medium pass
Tpra02G0010400.1 Phenylpropanoid CSE low borderline
Tpra02G0027310.1 Phenylpropanoid CSE medium pass
Tpra02G0027310.2 Phenylpropanoid CSE medium pass
Tpra02G0030610.1 Phenylpropanoid CSE medium pass
Tpra03G0010070.1 Phenylpropanoid CSE medium pass