PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2510
Candidate Protein Records
2106
Pathway-Level Records
5331
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Tpra05G0012010.1 Flavonoid IFS low borderline
Tpra05G0012890.1 Flavonoid IFS low borderline
Tpra06G0000090.1 Flavonoid IFS medium borderline
Tpra06G0008850.1 Flavonoid IFS medium borderline
Tpra06G0009060.1 Flavonoid IFS medium borderline
Tpra06G0012880.1 Flavonoid IFS low borderline
Tpra06G0012890.1 Flavonoid IFS low borderline
Tpra06G0015420.1 Flavonoid IFS low borderline
Tpra06G0016740.1 Flavonoid IFS low borderline
Tpra06G0016840.1 Flavonoid IFS low borderline
Tpra06G0019480.1 Flavonoid IFS medium borderline
Tpra06G0022970.1 Flavonoid IFS medium borderline
Tpra06G0024450.1 Flavonoid IFS medium borderline
Tpra06G0024650.1 Flavonoid IFS medium borderline
Tpra06G0025610.1 Flavonoid IFS low borderline
Tpra06G0026150.1 Flavonoid IFS medium borderline
Tpra07G0010330.1 Flavonoid IFS medium borderline
Tpra07G0010350.1 Flavonoid IFS medium borderline
Tpra07G0014100.1 Flavonoid IFS medium borderline
Tpra07G0016310.1 Flavonoid IFS low borderline
Tpra07G0019860.1 Flavonoid IFS medium borderline
Tpra07G0024020.1 Flavonoid IFS low borderline
Tpra07G0024050.1 Flavonoid IFS low borderline
Tpra07G0025070.1 Flavonoid IFS medium borderline
Tpra07G0025220.1 Flavonoid IFS low borderline
Tpra07G0025230.1 Flavonoid IFS low borderline
Tpra07G0028150.1 Flavonoid IFS low borderline
Tpra07G0028170.1 Flavonoid IFS low borderline
Tpra07G0028180.1 Flavonoid IFS low borderline
Tpra07G0028190.1 Flavonoid IFS low borderline
Tpra07G0028200.1 Flavonoid IFS low borderline
Tpra07G0028210.1 Flavonoid IFS low borderline
Tpra07G0028220.1 Flavonoid IFS low borderline
Tpra07G0028990.1 Flavonoid IFS medium borderline
Tpra07G0031850.1 Flavonoid IFS low borderline
Tpra07G0034300.1 Flavonoid IFS medium borderline
Tpra07G0034490.1 Flavonoid IFS low borderline
Tpra07G0034590.1 Flavonoid IFS low borderline
TpraFKJA01000171.10007100.1 Flavonoid IFS low borderline
TpraFKJA01000190.10010010.1 Flavonoid IFS medium borderline
TpraFKJA01000201.10011620.1 Flavonoid IFS low borderline
TpraFKJA01000207.10013300.1 Flavonoid IFS low borderline
TpraFKJA01000242.10018290.1 Flavonoid IFS low borderline
TpraFKJA01000260.10019680.1 Flavonoid IFS low borderline
TpraFKJA01000264.10020230.1 Flavonoid IFS low borderline
TpraFKJA01000286.10023110.1 Flavonoid IFS medium borderline
TpraFKJA01000286.10023210.1 Flavonoid IFS low borderline
TpraFKJA01000286.10023290.1 Flavonoid IFS low borderline
TpraFKJA01000292.10023960.1 Flavonoid IFS low borderline
TpraFKJA01000292.10023980.1 Flavonoid IFS low borderline