PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2510
Candidate Protein Records
2106
Pathway-Level Records
5331
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Tpra06G0022860.1 Flavonoid UFGT medium pass
Tpra06G0023400.1 Flavonoid UFGT high pass
Tpra07G0003770.1 Flavonoid UFGT medium pass
Tpra07G0003780.1 Flavonoid UFGT low borderline
Tpra07G0004210.1 Flavonoid UFGT medium pass
Tpra07G0018620.1 Flavonoid UFGT high pass
Tpra07G0018630.1 Flavonoid UFGT high pass
Tpra07G0028430.1 Flavonoid UFGT medium pass
Tpra07G0030520.1 Flavonoid UFGT high pass
Tpra07G0030530.1 Flavonoid UFGT medium pass
Tpra07G0030550.1 Flavonoid UFGT high pass
Tpra07G0030560.1 Flavonoid UFGT high pass
Tpra07G0030570.1 Flavonoid UFGT medium pass
Tpra07G0030580.1 Flavonoid UFGT high pass
Tpra07G0030590.1 Flavonoid UFGT high pass
Tpra07G0030600.1 Flavonoid UFGT medium pass
Tpra07G0030610.1 Flavonoid UFGT low borderline
Tpra07G0034390.1 Flavonoid UFGT medium pass
TpraFKJA01000089.10001680.1 Flavonoid UFGT medium pass
TpraFKJA01000089.10001690.1 Flavonoid UFGT high pass
TpraFKJA01000089.10001710.1 Flavonoid UFGT medium pass
TpraFKJA01000089.10001750.1 Flavonoid UFGT medium pass
TpraFKJA01000127.10003500.1 Flavonoid UFGT high pass
TpraFKJA01000127.10003510.1 Flavonoid UFGT high pass
TpraFKJA01000186.10009650.1 Flavonoid UFGT medium pass
TpraFKJA01000201.10011760.1 Flavonoid UFGT medium pass
TpraFKJA01000201.10011770.1 Flavonoid UFGT medium pass
TpraFKJA01000201.10011780.1 Flavonoid UFGT medium pass
TpraFKJA01000201.10011800.1 Flavonoid UFGT medium pass
TpraFKJA01000201.10011820.1 Flavonoid UFGT medium pass
TpraFKJA01000242.10018400.1 Flavonoid UFGT high pass
TpraFKJA01000332.10028360.1 Flavonoid UFGT high pass
TpraFKJA01000414.10036850.1 Flavonoid UFGT high pass
TpraFKJA01000414.10036870.1 Flavonoid UFGT medium pass
TpraFKJA01000416.10037550.1 Flavonoid UFGT medium pass
TpraFKJA01000446.10040380.1 Flavonoid UFGT high pass
TpraFKJA01000446.10040390.1 Flavonoid UFGT high pass
TpraFKJA01000479.10044590.1 Flavonoid UFGT medium pass
TpraFKJA01000491.10045480.1 Flavonoid UFGT medium pass
TpraFKJA01000491.10045490.1 Flavonoid UFGT medium pass
TpraFKJA01000518.10047780.1 Flavonoid UFGT medium pass
TpraFKJA01000518.10047800.1 Flavonoid UFGT medium pass
TpraFKJA01000518.10047810.1 Flavonoid UFGT high pass
TpraFKJA01000521.10048200.1 Flavonoid UFGT medium pass
TpraFKJA01000521.10048210.1 Flavonoid UFGT medium pass
TpraFKJA01000521.10048220.1 Flavonoid UFGT medium pass
TpraFKJA01000521.10048230.1 Flavonoid UFGT medium pass
TpraFKJA01000521.10048240.1 Flavonoid UFGT high pass
TpraFKJA01000521.10048250.1 Flavonoid UFGT medium pass
TpraFKJA01000521.10048260.1 Flavonoid UFGT high pass