PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2510
Candidate Protein Records
2106
Pathway-Level Records
5331
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
TpraFKJA01002219.10110000.1 Phenylpropanoid POD medium pass POD__00012__sp_Q10N21_APX1_ORYSJ
TpraFKJA01002327.10110850.1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
TpraFKJA01002327.10110860.1 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
TpraFKJA01002701.10113280.1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
TpraFKJA01003096.10115270.1 Phenylpropanoid POD medium pass POD__00013__sp_Q4W1I8_PER1_ZINEL
TpraFKJA01003229.10116100.1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
TpraFKJA01004051.10119780.1 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
TpraFKJA01006344.10127980.1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
TpraFKJA01006518.10128530.1 Phenylpropanoid POD medium pass POD__00013__sp_Q4W1I8_PER1_ZINEL
TpraFKJA01007194.10130440.1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
TpraFKJA01008271.10133550.1 Phenylpropanoid POD medium pass POD__00016__sp_Q6QPJ6_PRXQ_POPJC
TpraFKJA01011108.10140930.1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
TpraFKJA01011939.10143070.1 Phenylpropanoid POD medium pass POD__00026__sp_Q9XEX2_PRX2B_ARATH
TpraFKJA01013497.10146850.1 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
TpraFKJA01014241.10148350.1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
TpraFKJA01018504.10156440.1 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
TpraFKJA01019310.10157820.1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
TpraFKJA01020290.10159640.1 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
TpraFKJA01029514.10173080.1 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
TpraFKJA01034733.10179290.1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
TpraFKJA01038364.10183130.1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA