PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2510
Candidate Protein Records
2106
Pathway-Level Records
5331
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Tpra03G0006640.1 Alkaloid T16H medium borderline
Tpra03G0012950.1 Alkaloid T16H medium borderline
Tpra03G0012960.1 Alkaloid T16H medium borderline
Tpra03G0012970.1 Alkaloid T16H medium borderline
Tpra03G0012980.1 Alkaloid T16H medium borderline
Tpra03G0012990.1 Alkaloid T16H medium borderline
Tpra03G0017650.1 Alkaloid T16H medium borderline
Tpra03G0030160.1 Alkaloid T16H medium borderline
Tpra04G0030720.1 Alkaloid T16H medium borderline
Tpra05G0004650.1 Alkaloid T16H low borderline
Tpra05G0008390.1 Alkaloid T16H medium borderline
Tpra06G0000090.1 Alkaloid T16H medium borderline
Tpra06G0008860.1 Alkaloid T16H medium borderline
Tpra06G0008900.1 Alkaloid T16H medium pass
Tpra06G0009050.1 Alkaloid T16H medium borderline
Tpra06G0019480.1 Alkaloid T16H medium borderline
Tpra07G0016580.1 Alkaloid T16H medium borderline
TpraFKJA01000186.10009610.1 Alkaloid T16H medium borderline
TpraFKJA01000286.10023110.1 Alkaloid T16H medium borderline
TpraFKJA01000286.10023210.1 Alkaloid T16H low borderline
TpraFKJA01000292.10023980.1 Alkaloid T16H medium borderline
TpraFKJA01000337.10029270.1 Alkaloid T16H medium pass
TpraFKJA01000337.10029290.1 Alkaloid T16H low borderline
TpraFKJA01000337.10029320.1 Alkaloid T16H low borderline
TpraFKJA01000341.10029910.1 Alkaloid T16H medium borderline
TpraFKJA01000367.10032140.1 Alkaloid T16H medium borderline
TpraFKJA01000408.10036300.1 Alkaloid T16H medium borderline
TpraFKJA01000578.10054600.1 Alkaloid T16H medium borderline
TpraFKJA01000597.10056940.1 Alkaloid T16H low borderline
TpraFKJA01004014.10119650.1 Alkaloid T16H medium borderline
TpraFKJA01004944.10123020.1 Alkaloid T16H low borderline
TpraFKJA01006174.10127420.1 Alkaloid T16H medium borderline
TpraFKJA01009000.10135480.1 Alkaloid T16H medium borderline
TpraFKJA01009463.10136710.1 Alkaloid T16H medium borderline
TpraFKJA01009764.10137430.1 Alkaloid T16H medium pass
TpraFKJA01010275.10138860.1 Alkaloid T16H low borderline
TpraFKJA01011244.10141330.1 Alkaloid T16H low borderline
TpraFKJA01011331.10141500.1 Alkaloid T16H medium borderline
TpraFKJA01014618.10149160.1 Alkaloid T16H medium borderline
TpraFKJA01015930.10151900.1 Alkaloid T16H medium borderline
TpraFKJA01019639.10158480.1 Alkaloid T16H medium borderline
TpraFKJA01025380.10167170.1 Alkaloid T16H low borderline
TpraFKJA01026642.10169070.1 Alkaloid T16H medium borderline
TpraFKJA01027031.10169670.1 Alkaloid T16H medium borderline
TpraFKJA01039053.10183780.1 Alkaloid T16H medium borderline
Tpra01G0001630.1 Alkaloid T3O medium borderline
Tpra01G0015010.1 Alkaloid T3O medium borderline
Tpra01G0015540.1 Alkaloid T3O medium pass
Tpra01G0015560.1 Alkaloid T3O low borderline
Tpra01G0015930.1 Alkaloid T3O medium borderline