PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2510
Candidate Protein Records
2106
Pathway-Level Records
5331
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Tpra02G0036120.1 Flavonoid 4CL medium pass
Tpra03G0005790.1 Flavonoid 4CL low borderline
Tpra03G0005800.1 Flavonoid 4CL low borderline
Tpra03G0015560.1 Flavonoid 4CL low borderline
Tpra03G0017290.1 Flavonoid 4CL low borderline
Tpra03G0026310.1 Flavonoid 4CL low borderline
Tpra04G0010500.1 Flavonoid 4CL medium pass
Tpra04G0013980.1 Flavonoid 4CL medium pass
Tpra04G0017830.1 Flavonoid 4CL medium pass
Tpra04G0025240.1 Flavonoid 4CL low borderline
Tpra04G0027670.1 Flavonoid 4CL medium pass
Tpra05G0005370.1 Flavonoid 4CL medium pass
Tpra06G0007020.1 Flavonoid 4CL medium pass
Tpra06G0010330.1 Flavonoid 4CL medium pass
Tpra06G0015010.1 Flavonoid 4CL medium pass
Tpra06G0015020.1 Flavonoid 4CL medium pass
Tpra06G0016490.1 Flavonoid 4CL medium pass
Tpra07G0007030.1 Flavonoid 4CL medium pass
Tpra07G0013700.1 Flavonoid 4CL low borderline
Tpra07G0013700.2 Flavonoid 4CL low borderline
Tpra07G0018330.1 Flavonoid 4CL medium pass
Tpra07G0025990.1 Flavonoid 4CL low borderline
TpraFKJA01000367.10032270.1 Flavonoid 4CL medium pass
TpraFKJA01000367.10032280.1 Flavonoid 4CL medium pass
TpraFKJA01000465.10042310.1 Flavonoid 4CL medium pass
TpraFKJA01000593.10056280.1 Flavonoid 4CL medium pass
TpraFKJA01000593.10056290.1 Flavonoid 4CL medium pass
TpraFKJA01000711.10066700.1 Flavonoid 4CL low borderline
TpraFKJA01000827.10075790.1 Flavonoid 4CL medium pass
TpraFKJA01000842.10076870.1 Flavonoid 4CL low borderline
TpraFKJA01000842.10076880.1 Flavonoid 4CL low borderline
TpraFKJA01001097.10091170.1 Flavonoid 4CL low borderline
TpraFKJA01001175.10094040.1 Flavonoid 4CL medium pass
TpraFKJA01001569.10103560.1 Flavonoid 4CL medium pass
TpraFKJA01002206.10109910.1 Flavonoid 4CL medium pass
TpraFKJA01006031.10126960.1 Flavonoid 4CL medium pass
TpraFKJA01007083.10130110.1 Flavonoid 4CL medium pass
TpraFKJA01007582.10131590.1 Flavonoid 4CL medium pass
TpraFKJA01010823.10140210.1 Flavonoid 4CL low borderline
TpraFKJA01012066.10143420.1 Flavonoid 4CL medium pass
TpraFKJA01015612.10151170.1 Flavonoid 4CL medium pass
TpraFKJA01021995.10162150.1 Flavonoid 4CL medium pass
TpraFKJA01028921.10172250.1 Flavonoid 4CL medium pass
TpraFKJA01032165.10176260.1 Flavonoid 4CL medium pass
Tpra02G0013910.1 Flavonoid ANR low borderline
Tpra02G0016860.1 Flavonoid ANR low borderline
Tpra02G0032150.1 Flavonoid ANR medium borderline
Tpra03G0013850.1 Flavonoid ANR medium borderline
Tpra03G0035290.1 Flavonoid ANR medium borderline
Tpra04G0022290.1 Flavonoid ANR medium borderline