PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2510
Candidate Protein Records
2106
Pathway-Level Records
5331
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Tpra01G0022470.1 Flavonoid F3H low borderline
Tpra01G0024100.1 Flavonoid F3H medium borderline
Tpra01G0024110.1 Flavonoid F3H low borderline
Tpra02G0003440.1 Flavonoid F3H medium borderline
Tpra02G0008000.1 Flavonoid F3H medium borderline
Tpra02G0019390.1 Flavonoid F3H medium borderline
Tpra02G0020790.1 Flavonoid F3H medium borderline
Tpra02G0024790.1 Flavonoid F3H low borderline
Tpra02G0028990.1 Flavonoid F3H medium borderline
Tpra02G0033300.1 Flavonoid F3H medium borderline
Tpra02G0035290.1 Flavonoid F3H medium borderline
Tpra03G0001350.1 Flavonoid F3H low borderline
Tpra03G0001360.1 Flavonoid F3H low borderline
Tpra03G0008600.1 Flavonoid F3H medium pass
Tpra03G0009110.1 Flavonoid F3H medium borderline
Tpra03G0009120.1 Flavonoid F3H low borderline
Tpra03G0009480.1 Flavonoid F3H medium borderline
Tpra03G0009510.1 Flavonoid F3H medium borderline
Tpra03G0009870.1 Flavonoid F3H medium borderline
Tpra03G0016000.1 Flavonoid F3H medium pass
Tpra03G0016860.1 Flavonoid F3H medium borderline
Tpra03G0023840.1 Flavonoid F3H medium borderline
Tpra03G0025010.1 Flavonoid F3H medium borderline
Tpra03G0026650.1 Flavonoid F3H low borderline
Tpra03G0029780.1 Flavonoid F3H medium pass
Tpra03G0029790.1 Flavonoid F3H medium borderline
Tpra04G0001750.1 Flavonoid F3H medium borderline
Tpra04G0016390.1 Flavonoid F3H low borderline
Tpra04G0019280.1 Flavonoid F3H medium borderline
Tpra04G0019300.1 Flavonoid F3H medium borderline
Tpra04G0019330.1 Flavonoid F3H medium borderline
Tpra04G0019340.1 Flavonoid F3H medium borderline
Tpra04G0024670.1 Flavonoid F3H medium borderline
Tpra04G0025260.1 Flavonoid F3H low borderline
Tpra04G0026980.1 Flavonoid F3H medium borderline
Tpra04G0026990.1 Flavonoid F3H medium borderline
Tpra05G0002470.1 Flavonoid F3H low borderline
Tpra05G0009320.1 Flavonoid F3H low borderline
Tpra05G0011910.1 Flavonoid F3H medium borderline
Tpra06G0002920.1 Flavonoid F3H low borderline
Tpra06G0003310.1 Flavonoid F3H medium borderline
Tpra06G0021850.1 Flavonoid F3H medium borderline
Tpra06G0023750.1 Flavonoid F3H medium borderline
Tpra06G0025650.1 Flavonoid F3H medium pass
Tpra06G0025660.1 Flavonoid F3H low borderline
Tpra06G0025670.1 Flavonoid F3H medium borderline
Tpra07G0001790.1 Flavonoid F3H medium borderline
Tpra07G0004170.1 Flavonoid F3H low borderline
Tpra07G0004180.1 Flavonoid F3H medium borderline
Tpra07G0009250.1 Flavonoid F3H medium borderline