PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2510
Candidate Protein Records
2106
Pathway-Level Records
5331
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
TpraFKJA01003014.10114950.1 Steroid SMT1/SMT2/SMT3 medium pass
TpraFKJA01003605.10117820.1 Steroid SMT1/SMT2/SMT3 medium pass
TpraFKJA01003625.10117920.1 Steroid SMT1/SMT2/SMT3 medium pass
TpraFKJA01006086.10127120.1 Steroid SMT1/SMT2/SMT3 medium pass
TpraFKJA01008206.10133370.1 Steroid SMT1/SMT2/SMT3 medium pass
TpraFKJA01013453.10146750.1 Steroid SMT1/SMT2/SMT3 medium pass
TpraFKJA01029920.10173700.1 Steroid SMT1/SMT2/SMT3 medium pass
Tpra01G0020500.1 Steroid SQE medium pass
Tpra02G0033000.1 Steroid SQE medium pass
Tpra07G0019320.1 Steroid SQE medium pass
Tpra07G0019340.1 Steroid SQE medium pass
TpraFKJA01000268.10020690.1 Steroid SQE medium pass
TpraFKJA01000268.10020700.1 Steroid SQE low borderline
TpraFKJA01001186.10094450.1 Steroid SQE low borderline
TpraFKJA01004992.10123250.1 Steroid SQE medium pass
TpraFKJA01038177.10182880.1 Steroid SQE medium pass
Tpra02G0025650.1 Steroid SQS/FDFT1 medium pass
Tpra02G0025650.2 Steroid SQS/FDFT1 medium pass
Tpra02G0032680.1 Steroid SQS/FDFT1 low borderline
Tpra02G0032680.2 Steroid SQS/FDFT1 low borderline
Tpra03G0019630.1 Steroid SQS/FDFT1 high pass
Tpra05G0014530.1 Steroid SQS/FDFT1 medium pass
TpraFKJA01000342.10030220.1 Steroid SQS/FDFT1 low borderline
TpraFKJA01000521.10048170.1 Steroid SQS/FDFT1 medium pass
Tpra01G0031140.1 Terpenoid AACT low borderline
Tpra02G0023280.1 Terpenoid AACT medium borderline
Tpra03G0019190.1 Terpenoid AACT low borderline
Tpra04G0030430.1 Terpenoid AACT medium borderline
TpraFKJA01000544.10050590.1 Terpenoid AACT medium borderline
TpraFKJA01000585.10055520.1 Terpenoid AACT medium borderline
TpraFKJA01000961.10084040.1 Terpenoid AACT low borderline
TpraFKJA01012604.10144700.1 Terpenoid AACT low borderline
Tpra01G0000860.1 Terpenoid BAHD medium pass
Tpra01G0002470.1 Terpenoid BAHD low borderline
Tpra01G0002510.1 Terpenoid BAHD low borderline
Tpra01G0004660.1 Terpenoid BAHD medium pass
Tpra01G0009370.1 Terpenoid BAHD medium pass
Tpra01G0011850.1 Terpenoid BAHD medium pass
Tpra01G0013520.1 Terpenoid BAHD medium pass
Tpra01G0017220.1 Terpenoid BAHD low borderline
Tpra01G0017350.1 Terpenoid BAHD medium pass
Tpra01G0017420.1 Terpenoid BAHD medium pass
Tpra01G0018540.1 Terpenoid BAHD low borderline
Tpra01G0018560.1 Terpenoid BAHD low borderline
Tpra01G0018580.1 Terpenoid BAHD low borderline
Tpra01G0019780.1 Terpenoid BAHD medium pass
Tpra01G0025670.1 Terpenoid BAHD medium pass
Tpra01G0026230.1 Terpenoid BAHD medium pass
Tpra01G0027720.1 Terpenoid BAHD low borderline
Tpra01G0028550.1 Terpenoid BAHD medium pass