PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2510
Candidate Protein Records
2106
Pathway-Level Records
5331
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
TpraFKJA01001831.10106650.1 Phenylpropanoid C4H/CYP73A low borderline
TpraFKJA01005444.10124810.1 Phenylpropanoid C4H/CYP73A medium borderline
TpraFKJA01006980.10129860.1 Phenylpropanoid C4H/CYP73A low borderline
TpraFKJA01007491.10131320.1 Phenylpropanoid C4H/CYP73A low borderline
TpraFKJA01009463.10136710.1 Phenylpropanoid C4H/CYP73A medium borderline
TpraFKJA01009764.10137430.1 Phenylpropanoid C4H/CYP73A low borderline
TpraFKJA01010275.10138860.1 Phenylpropanoid C4H/CYP73A low borderline
TpraFKJA01011997.10143220.1 Phenylpropanoid C4H/CYP73A medium pass
TpraFKJA01015286.10150510.1 Phenylpropanoid C4H/CYP73A low borderline
TpraFKJA01017025.10153860.1 Phenylpropanoid C4H/CYP73A low borderline
TpraFKJA01023676.10164770.1 Phenylpropanoid C4H/CYP73A low borderline
TpraFKJA01028948.10172290.1 Phenylpropanoid C4H/CYP73A medium borderline
TpraFKJA01033925.10178240.1 Phenylpropanoid C4H/CYP73A medium borderline
TpraFKJA01035245.10179820.1 Phenylpropanoid C4H/CYP73A low borderline
Tpra01G0005190.1 Phenylpropanoid CAD medium pass
Tpra01G0027400.1 Phenylpropanoid CAD medium pass
Tpra02G0004230.1 Phenylpropanoid CAD low borderline
Tpra02G0007750.1 Phenylpropanoid CAD low borderline
Tpra02G0009320.1 Phenylpropanoid CAD low borderline
Tpra02G0022230.1 Phenylpropanoid CAD medium pass
Tpra02G0032150.1 Phenylpropanoid CAD medium borderline
Tpra03G0002590.1 Phenylpropanoid CAD low borderline
Tpra03G0004390.1 Phenylpropanoid CAD medium pass
Tpra03G0004400.1 Phenylpropanoid CAD low borderline
Tpra03G0013750.1 Phenylpropanoid CAD low borderline
Tpra03G0013850.1 Phenylpropanoid CAD medium borderline
Tpra03G0013900.1 Phenylpropanoid CAD low borderline
Tpra03G0031510.1 Phenylpropanoid CAD low borderline
Tpra03G0035290.1 Phenylpropanoid CAD medium borderline
Tpra04G0004740.1 Phenylpropanoid CAD medium pass
Tpra04G0005630.1 Phenylpropanoid CAD medium pass
Tpra04G0005640.1 Phenylpropanoid CAD medium pass
Tpra04G0007660.1 Phenylpropanoid CAD low borderline
Tpra04G0017080.1 Phenylpropanoid CAD medium pass
Tpra04G0020020.1 Phenylpropanoid CAD low borderline
Tpra04G0020150.1 Phenylpropanoid CAD low borderline
Tpra04G0021320.1 Phenylpropanoid CAD medium pass
Tpra05G0002780.1 Phenylpropanoid CAD low borderline
Tpra06G0009300.1 Phenylpropanoid CAD low borderline
Tpra07G0009140.1 Phenylpropanoid CAD low borderline
Tpra07G0027250.1 Phenylpropanoid CAD low borderline
Tpra07G0027530.1 Phenylpropanoid CAD low borderline
Tpra07G0030880.1 Phenylpropanoid CAD medium pass
Tpra07G0032120.1 Phenylpropanoid CAD medium borderline
TpraFKJA01000291.10023810.1 Phenylpropanoid CAD low borderline
TpraFKJA01000321.10026880.1 Phenylpropanoid CAD low borderline
TpraFKJA01000359.10031490.1 Phenylpropanoid CAD low borderline
TpraFKJA01000415.10037130.1 Phenylpropanoid CAD medium borderline
TpraFKJA01000415.10037140.1 Phenylpropanoid CAD medium borderline
TpraFKJA01000415.10037150.1 Phenylpropanoid CAD medium borderline