PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2510
Candidate Protein Records
2106
Pathway-Level Records
5331
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Tpra04G0027730.1 Steroid DWF5 medium borderline
TpraFKJA01000786.10073340.1 Steroid DWF5 low borderline
TpraFKJA01000202.10011920.1 Steroid DWF7 medium pass
Tpra01G0017720.1 Steroid FK high pass
Tpra07G0010320.1 Steroid HYD1 high pass
Tpra07G0010340.1 Steroid HYD1 medium pass
TpraFKJA01001372.10099890.1 Steroid HYD1 medium pass
Tpra02G0012640.1 Steroid ROT3/CYP90C1 medium borderline
Tpra02G0012660.1 Steroid ROT3/CYP90C1 medium borderline
Tpra02G0034300.1 Steroid ROT3/CYP90C1 medium borderline
Tpra03G0023750.1 Steroid ROT3/CYP90C1 medium borderline
Tpra03G0025000.1 Steroid ROT3/CYP90C1 medium borderline
Tpra04G0000700.1 Steroid ROT3/CYP90C1 low borderline
Tpra04G0000730.1 Steroid ROT3/CYP90C1 medium borderline
Tpra04G0005900.1 Steroid ROT3/CYP90C1 medium borderline
Tpra04G0023130.1 Steroid ROT3/CYP90C1 medium borderline
Tpra06G0015420.1 Steroid ROT3/CYP90C1 medium borderline
Tpra06G0025610.1 Steroid ROT3/CYP90C1 medium borderline
Tpra07G0011760.1 Steroid ROT3/CYP90C1 medium pass
Tpra07G0016580.1 Steroid ROT3/CYP90C1 medium borderline
Tpra07G0034590.1 Steroid ROT3/CYP90C1 medium borderline
TpraFKJA01000242.10018300.1 Steroid ROT3/CYP90C1 medium borderline
TpraFKJA01000292.10023990.1 Steroid ROT3/CYP90C1 medium borderline
TpraFKJA01000408.10036300.1 Steroid ROT3/CYP90C1 low borderline
TpraFKJA01000748.10069710.1 Steroid ROT3/CYP90C1 medium borderline
TpraFKJA01000849.10077450.1 Steroid ROT3/CYP90C1 medium borderline
Tpra02G0015890.1 Steroid SMO1/SMO2 medium pass
Tpra05G0008480.1 Steroid SMO1/SMO2 medium pass
TpraFKJA01001169.10093860.1 Steroid SMO1/SMO2 medium pass
TpraFKJA01004627.10121790.1 Steroid SMO1/SMO2 medium pass
Tpra01G0011850.1 Steroid SMT1/SMT2/SMT3 low borderline
Tpra01G0018540.1 Steroid SMT1/SMT2/SMT3 low borderline
Tpra01G0018560.1 Steroid SMT1/SMT2/SMT3 low borderline
Tpra01G0018580.1 Steroid SMT1/SMT2/SMT3 medium pass
Tpra01G0021120.1 Steroid SMT1/SMT2/SMT3 low borderline
Tpra02G0009270.1 Steroid SMT1/SMT2/SMT3 medium pass
Tpra02G0024630.1 Steroid SMT1/SMT2/SMT3 low borderline
Tpra02G0026050.1 Steroid SMT1/SMT2/SMT3 medium pass
Tpra02G0037180.1 Steroid SMT1/SMT2/SMT3 low borderline
Tpra02G0037190.1 Steroid SMT1/SMT2/SMT3 low borderline
Tpra02G0037200.1 Steroid SMT1/SMT2/SMT3 medium pass
Tpra03G0001690.1 Steroid SMT1/SMT2/SMT3 low borderline
Tpra03G0001690.2 Steroid SMT1/SMT2/SMT3 low borderline
Tpra03G0003020.1 Steroid SMT1/SMT2/SMT3 low borderline
Tpra03G0008410.1 Steroid SMT1/SMT2/SMT3 low borderline
Tpra03G0014970.1 Steroid SMT1/SMT2/SMT3 medium pass
Tpra03G0014980.1 Steroid SMT1/SMT2/SMT3 medium pass
Tpra03G0017970.1 Steroid SMT1/SMT2/SMT3 low borderline
Tpra03G0021740.1 Steroid SMT1/SMT2/SMT3 low borderline
Tpra03G0035820.1 Steroid SMT1/SMT2/SMT3 low borderline