PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

526
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
TRsanscaffold_20078200 Flavonoid C4H medium borderline
TRsanscaffold_50153870 Flavonoid C4H low borderline
TRsanscaffold_100014220 Rosmarinic Acid C4H medium pass
TRsanscaffold_100014260 Rosmarinic Acid C4H low borderline
TRsanscaffold_100014270 Rosmarinic Acid C4H low borderline
TRsanscaffold_100014290 Rosmarinic Acid C4H medium pass
TRsanscaffold_100014460 Rosmarinic Acid C4H low borderline
TRsanscaffold_100014680 Rosmarinic Acid C4H low borderline
TRsanscaffold_100016120 Rosmarinic Acid C4H low borderline
TRsanscaffold_100033810 Rosmarinic Acid C4H low borderline
TRsanscaffold_100036580 Rosmarinic Acid C4H low borderline
TRsanscaffold_100038090 Rosmarinic Acid C4H medium pass
TRsanscaffold_10006290 Rosmarinic Acid C4H low borderline
TRsanscaffold_10007260 Rosmarinic Acid C4H low borderline
TRsanscaffold_110041950 Rosmarinic Acid C4H medium pass
TRsanscaffold_110042130 Rosmarinic Acid C4H medium pass
TRsanscaffold_110042140 Rosmarinic Acid C4H low borderline
TRsanscaffold_110044680 Rosmarinic Acid C4H low borderline
TRsanscaffold_110044710 Rosmarinic Acid C4H low borderline
TRsanscaffold_110044720 Rosmarinic Acid C4H low borderline
TRsanscaffold_110045360 Rosmarinic Acid C4H low borderline
TRsanscaffold_110049110 Rosmarinic Acid C4H low borderline
TRsanscaffold_120050500 Rosmarinic Acid C4H low borderline
TRsanscaffold_120050520 Rosmarinic Acid C4H medium pass
TRsanscaffold_120050650 Rosmarinic Acid C4H medium pass
TRsanscaffold_120050820 Rosmarinic Acid C4H low borderline
TRsanscaffold_120051110 Rosmarinic Acid C4H low borderline
TRsanscaffold_120051210 Rosmarinic Acid C4H medium pass
TRsanscaffold_130055210 Rosmarinic Acid C4H low borderline
TRsanscaffold_20064030 Rosmarinic Acid C4H low borderline
TRsanscaffold_20064360 Rosmarinic Acid C4H medium pass
TRsanscaffold_20065760 Rosmarinic Acid C4H medium pass
TRsanscaffold_20065880 Rosmarinic Acid C4H low borderline
TRsanscaffold_20065890 Rosmarinic Acid C4H low borderline
TRsanscaffold_20067470 Rosmarinic Acid C4H low borderline
TRsanscaffold_20072700 Rosmarinic Acid C4H low borderline
TRsanscaffold_20073730 Rosmarinic Acid C4H low borderline
TRsanscaffold_20078200 Rosmarinic Acid C4H medium pass
TRsanscaffold_20078920 Rosmarinic Acid C4H medium pass
TRsanscaffold_20082400 Rosmarinic Acid C4H low borderline
TRsanscaffold_20083470 Rosmarinic Acid C4H low borderline
TRsanscaffold_20092000 Rosmarinic Acid C4H medium pass
TRsanscaffold_20092810 Rosmarinic Acid C4H low borderline
TRsanscaffold_20094690 Rosmarinic Acid C4H medium pass
TRsanscaffold_20095700 Rosmarinic Acid C4H medium pass
TRsanscaffold_20096860 Rosmarinic Acid C4H medium pass
TRsanscaffold_20096970 Rosmarinic Acid C4H low borderline
TRsanscaffold_20096980 Rosmarinic Acid C4H low borderline
TRsanscaffold_20097010 Rosmarinic Acid C4H low borderline
TRsanscaffold_20097040 Rosmarinic Acid C4H low borderline